KEGG   Flavobacterium psychrophilum 950106-1/1: IB65_00910
Entry
IB65_00910        CDS       T03412                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
fpq  Flavobacterium psychrophilum 950106-1/1
Brite
KEGG Orthology (KO) [BR:fpq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fpq03019]
    IB65_00910
   03009 Ribosome biogenesis [BR:fpq03009]
    IB65_00910
   03036 Chromosome and associated proteins [BR:fpq03036]
    IB65_00910
Enzymes [BR:fpq01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     IB65_00910
Messenger RNA biogenesis [BR:fpq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     IB65_00910
Ribosome biogenesis [BR:fpq03009]
 Eukaryotic type
  90S particles
   RNase
    IB65_00910
 Prokaryotic type
  rRNA processing factors
   IB65_00910
Chromosome and associated proteins [BR:fpq03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     IB65_00910
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm XhoI
Other DBs
NCBI-ProteinID: AIT64519
UniProt: A0A076NSN3
Position
206509..207249
AA seq 246 aa
MSFIKKIFLSSRSSEDGLFFSKLEKILGFKPLNLTHFRRAFTHRSMNKLDEKGNPMNYER
LEFMGDAMLGSVIAAHLFNMSPTGDEGYLTKMRSKIVSREHLNELGKDLNLIQFLESKVT
LQNFGENIHGNLFEAFVGAIYLDRGFVYCEKFIHKKVIKPYVDIDKLEGKVISYKSLLIE
WCQKEKRVFHYDIYEDEDAGKLKYFGVKLSIDGKVVAKARATSKKKAEEIASKRGYFVFQ
SEIDGK
NT seq 741 nt   +upstreamnt  +downstreamnt
atgagttttattaaaaaaatatttttaagttcccgttcttcagaggacgggctttttttt
agtaaactcgaaaaaatattaggatttaaacctttaaatcttactcattttcgcagagcc
tttacccatcgatcaatgaataagttagatgaaaaaggaaatccaatgaattatgagcgg
ctagaatttatgggcgatgctatgctgggaagtgttattgcagctcatttatttaatatg
tctcctacaggcgatgaaggatatttaactaaaatgagatctaaaattgtaagtcgtgaa
cacttaaacgaattaggaaaagatcttaatctgatacagtttttggaaagcaaagtaaca
cttcagaattttggagaaaacatacacggcaatctttttgaagcttttgttggagcgatt
taccttgatagaggttttgtgtattgcgagaaatttattcataaaaaagtcatcaaacct
tatgtagatattgataagttagaaggcaaagttattagctacaaaagcttacttatagag
tggtgtcagaaagaaaaaagggtatttcattacgatatttatgaagatgaagatgcaggg
aaactaaaatattttggtgtaaaactaagtattgatggtaaagttgttgcaaaagcccga
gccacatcaaaaaagaaggcagaagaaattgcctctaaaagagggtattttgtattccag
tcagaaatagacggaaaataa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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