KEGG   Flavobacterium psychrophilum 950106-1/1: IB65_05065
Entry
IB65_05065        CDS       T03412                                 
Name
(GenBank) DNA polymerase III subunit beta
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
fpq  Flavobacterium psychrophilum 950106-1/1
Pathway
fpq03030  DNA replication
fpq03430  Mismatch repair
fpq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fpq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    IB65_05065
   03430 Mismatch repair
    IB65_05065
   03440 Homologous recombination
    IB65_05065
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fpq03032]
    IB65_05065
   03400 DNA repair and recombination proteins [BR:fpq03400]
    IB65_05065
Enzymes [BR:fpq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     IB65_05065
DNA replication proteins [BR:fpq03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     IB65_05065
DNA repair and recombination proteins [BR:fpq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     IB65_05065
SSDB
Motif
Pfam: DNA_pol3_beta DNA_pol3_beta_2 DNA_pol3_beta_3
Other DBs
NCBI-ProteinID: AIT65267
UniProt: A0A076P473
Position
1116247..1117365
AA seq 372 aa
MKFIVSSSYLLKQLQVLGSVINSSNTLPILDNFLFELKKNELLVSASDLETTMSASLTID
SDSQGSVAVPAKLLLEILKTFPEQPLTFTVEENNTIEISSQSGKYALAYAPGDEFPKAVN
LEEPSKTIVPAEVLSTAVSKTIFAAGNDDLRPVMSGVFFQFSPEGLIFVATDAHKLVKYA
RTDVKASQVADFIMPRKPLNILKGILATSNEEVTIEYNDSNATFSFDNYILTCRLIDGKY
PNYEAVIPKENPNKLMIERTQFLSSVRRVAIFSNKTTHQIRLKIAGTELNISAEDIDYSN
KAEERLTCDYQGDDMQIGFNSRFLLEMLGNLQSDMIMLEMSMPNRAGILTPIDGLDEGET
VTMLVMPVMLNN
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgaagtttatagtatcaagttcctatttattaaaacaattacaagttttaggaagcgtt
atcaatagtagtaatacattgcctattttagataatttcctatttgaattaaagaaaaac
gaattattagtttctgcttcagatctagaaaccaccatgtcagcctcgcttactatcgat
tcagatagccaaggaagcgttgccgttcctgcaaaattattactagaaatactaaaaact
tttccagaacaacccctaacctttacagttgaagaaaacaacaccatcgaaattagctca
caatcaggaaaatacgcactagcctatgctccaggtgacgaatttccaaaagctgtaaac
ttagaagaaccctctaaaactattgttcctgccgaagtattatcaacagcagtaagcaaa
acaatctttgccgctggaaacgatgacctacgcccagtaatgtctggtgtcttttttcag
ttttcgccagaaggattaatttttgtggctaccgatgcacataaattagtaaaatatgcc
cgtaccgatgtaaaagcatcgcaagttgctgattttattatgccaagaaaacctttaaat
attttgaaaggaattctagctacttcaaacgaagaagtaaccatcgaatataacgattcg
aatgctactttctccttcgataattatatattaacttgtagattaattgacggtaaatac
cctaattatgaagcagttatcccaaaagaaaatccaaataaattaatgatagagagaacg
caatttttaagttctgtacgtcgtgtggcgattttctctaacaaaacaacacaccaaatt
agacttaaaattgcaggaacagaattaaatatttctgcagaagacatagattattcaaac
aaagcagaagagcgtttaacttgtgattatcaaggtgatgatatgcaaataggtttcaac
tcacgtttcttgttagaaatgctaggcaacctacaatcagatatgattatgctagaaatg
tctatgccaaacagagcaggaattcttacccctattgatggtcttgacgaaggcgaaacc
gttactatgcttgttatgcctgttatgctaaacaattag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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