KEGG   Flavobacterium psychrophilum Z2: AMR72_08245
Entry
AMR72_08245       CDS       T04556                                 
Name
(GenBank) pseudouridine synthase
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
fpsz  Flavobacterium psychrophilum Z2
Brite
KEGG Orthology (KO) [BR:fpsz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:fpsz03016]
    AMR72_08245
Enzymes [BR:fpsz01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     AMR72_08245
Transfer RNA biogenesis [BR:fpsz03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    AMR72_08245
 Prokaryotic type
    AMR72_08245
SSDB
Motif
Pfam: TruB_N TruB_C_2 PseudoU_synth_2
Other DBs
NCBI-ProteinID: ALM50730
Position
1869011..1869712
AA seq 233 aa
MLTAPEDFQEGKVLLIDKPLHWSSFQAVNKVKWALKKHLGLKKIKVGHAGTLDPLATGLL
IVCTGKFTKRIMELQGMPKEYTGTFMLGGTTPSYDLETEVNITYPTEHITETLVHDTVNQ
FMGEIDQQPPVFSAIKKDGKRLYEHARAGEEVEIAFRKTTIYEFEITRIALPEVDFRVVC
SKGTYIRSLANDFGKALNSGAHLTVLRRTKIGEFSVEGAISPQDFEDEVTPTA
NT seq 702 nt   +upstreamnt  +downstreamnt
attttgacggcacccgaagatttccaggaaggaaaagttttactgatagacaagccattg
cactggagttcttttcaggcagtgaataaagtaaaatgggctcttaagaaacatctgggg
cttaaaaaaataaaagtaggccacgccggaacattagatcccctggcaaccggactattg
attgtctgcaccggaaaatttaccaaacgcattatggaacttcagggcatgcccaaagag
tatacaggtacttttatgctgggcggcactaccccatcatacgacctggagaccgaagta
aatattacttaccctaccgaacatattaccgaaacactggtgcacgacaccgtaaatcag
tttatgggcgaaatagaccagcagccacctgtattttcggctattaaaaaagatggcaaa
aggctgtacgaacacgcccgcgccggagaagaagttgaaattgctttccgcaaaactacc
atatacgaatttgaaattacccgcattgccctacccgaagttgactttagggtggtatgc
agcaaaggtacttatatacgatcgctggcaaacgattttggtaaagcattaaattcgggc
gcacaccttaccgtattacgccgtaccaaaattggcgaattttctgttgaaggtgctata
tctccacaagactttgaagatgaagttacgccaactgcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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