KEGG   Fusarium pseudograminearum: FPSE_08489
Entry
FPSE_08489        CDS       T03456                                 
Name
(RefSeq) hypothetical protein
  KO
K14328  regulator of nonsense transcripts 3
Organism
fpu  Fusarium pseudograminearum
Pathway
fpu03013  Nucleocytoplasmic transport
fpu03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:fpu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    FPSE_08489
   03015 mRNA surveillance pathway
    FPSE_08489
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fpu03019]
    FPSE_08489
Messenger RNA biogenesis [BR:fpu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     FPSE_08489
   mRNA cycle factors
    P-body specific factors
     FPSE_08489
SSDB
Motif
Pfam: Smg4_UPF3 RRM_1
Other DBs
NCBI-GeneID: 20367107
NCBI-ProteinID: XP_009259882
UniProt: K3VYU3
Position
1:complement(4765095..4767275)
AA seq 670 aa
MSAQAPQVLSRRANGGSQASANQNSESTKGKGPQENSSHGKGRGRGSNTRSTETNKPANE
SETPKPTRTKAHNEGEKLTIRRLPPGMTEAEFASILGSEWEVGKGKVDWFCFAEGKISTD
PSKPSRPGRAYVHVMRKDDILPLSEAVRNAVWEDAKASFNSPSLIGPPVLDIAIYKKVPS
AKKRTDARQGTIDQDPDFMAFLEELANPTPPKEPDEGEEGDDLGKSENKVTTTPLIEYLK
EKKAKNVKDGTSSKNSKHGQGDSRSGKGKNASKEDDSGRKRGKDSKPDKADRAPKETVKI
LTKKAASEQNADGSKANSKNQANDANAQEAAPKSRRAGILAAARILQRDLGLSPGSAHRK
ARQDAAKADADTKTTPEKENQALTDAKTSNPEPPASPVKSNETETPAAKGRGAAGNSSKQ
QQPNRRTRGGKNADKNKERDNEKDNTREKDKNKGGPSGQTQAAPSPPIVLLKKKGNEAES
SQPAKPATSTPQPPTTQGGRSKTENSAGSSKSASNKGASAQKKPPTVSPDATRGFVKHAN
PSQGVTEALLKQTLSTFGTITFVEIDKRKGFAYVDFAEHDGLVKAVTASPITVAQGTVQV
LERKDKKPTNANSPAPATTPAAGSPAPEKTSGRGRRGRGGGGGSKAKDSGGNNQGATAAT
ATNSNPTNGG
NT seq 2013 nt   +upstreamnt  +downstreamnt
atgtcagctcaagcaccacaggtcttgtctagacgggcaaatgggggctcccaagcttca
gcgaatcagaattccgaatcaacaaagggcaagggaccgcaagagaacagttctcatgga
aagggcaggggaagaggttctaatacgagatccacagagacgaacaagcctgcgaatgaa
agcgagactcccaaacccaccagaactaaggctcataatgagggcgagaaactcacgata
cgccgtttgcctcctggaatgaccgaggcagaattcgcatccatacttggaagtgaatgg
gaggtgggcaaaggcaaggttgattggttttgttttgcagaaggaaagatctctacagac
ccctcgaaaccttctcggccaggtcgcgcttacgttcatgtgatgagaaaggatgatatc
ctgccattgagcgaagcagtacggaatgccgtctgggaagatgcaaaagcgtcattcaac
agcccgtctctgatcggcccccccgtacttgatattgccatttataaaaaggtcccgagc
gccaagaaacggactgatgcacgtcaaggaaccatcgaccaagatcccgatttcatggct
tttctggaagagcttgcaaacccaacaccaccaaaggaaccagacgaaggggaagagggt
gatgatcttggaaaatcagagaataaagtcacgacaacaccacttatcgaatatcttaag
gagaaaaaggcaaagaacgtgaaggatggcacgtcttccaaaaactcaaagcatgggcaa
ggagactcgagaagtggaaagggcaagaatgcatccaaggaggacgattctggaaggaag
agaggcaaagactctaaacccgacaaggcagacagggcgcccaaggagactgtcaagatt
ctcaccaaaaaggcagcttccgaacagaatgcggatggttcgaaagccaactctaaaaac
caggccaacgacgccaacgctcaggaggcagcgcccaagagccgacgcgcgggaattttg
gctgccgcaaggatcctacaacgagaccttggccttagtcctggaagtgcgcacaggaaa
gcacgccaagacgctgccaaagcagatgcggatacgaagacgacaccagaaaaggaaaac
caagctctcacagatgctaaaactagcaatcctgaacccccagcttcgccggtcaaatcg
aacgagactgagacgccagctgcaaagggcagaggcgccgctgggaactccagcaaacag
cagcaacctaaccgtagaacgcgtggcggtaagaacgcagataagaacaaggaaagggat
aatgagaaggacaacaccagagagaaggataagaataaaggagggccttcaggacaaacc
caagctgcacccagtcccccgattgttcttctaaagaagaaaggcaacgaagccgaatct
agtcagccagcgaaaccagcaaccagcacacctcagccgccaaccacgcaggggggtaga
tcgaagaccgaaaattcagccggtagctccaaaagtgcttctaacaagggagccagcgcc
cagaagaaaccccctactgtttctcctgatgctacccgtggcttcgtcaagcacgccaat
ccttctcagggagttaccgaggcactactcaagcagacactttcaacattcggaaccatc
acattcgttgagattgacaagcgcaaagggttcgcctatgttgactttgccgagcacgac
ggtctcgtaaaggccgttacggcaagccccattaccgttgcacagggcactgttcaggtt
ctggaacgtaaggataaaaagcctaccaatgcgaactcgcctgcgcctgcgaccacgcca
gctgctggatctcctgcaccagagaagacgtctggcagaggtagacgtggccgaggtgga
ggtggaggcagcaaggcaaaggactccggcggcaataaccagggcgctactgctgccacc
gccaccaactccaacccaacaaacggcggctga

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