KEGG   Flavobacterium psychrophilum V3-5: IA03_01380
Entry
IA03_01380        CDS       T03659                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
fpv  Flavobacterium psychrophilum V3-5
Pathway
fpv03030  DNA replication
fpv03410  Base excision repair
fpv03420  Nucleotide excision repair
fpv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fpv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    IA03_01380
   03410 Base excision repair
    IA03_01380
   03420 Nucleotide excision repair
    IA03_01380
   03440 Homologous recombination
    IA03_01380
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fpv03032]
    IA03_01380
   03400 DNA repair and recombination proteins [BR:fpv03400]
    IA03_01380
Enzymes [BR:fpv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     IA03_01380
DNA replication proteins [BR:fpv03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     IA03_01380
DNA repair and recombination proteins [BR:fpv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     IA03_01380
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     IA03_01380
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc HHH_2 HHH_5 HHH
Other DBs
NCBI-ProteinID: AIG29212
UniProt: A0A076NWX0
Position
complement(312143..314989)
AA seq 948 aa
MSQKRLYLLDAYALIFRGYFAFIKNPRINSKGMDTSAIMGFMNALMDVIKREKPDHLAVA
FDKGGSTYRYEMYQEYKAHRDETPEAIKIAVPYIQDLLKAMHIPIIEVAGFEADDLIGTL
AKQAEKEDFKVYMVTPDKDFAQLVSENIFMYKPARMGNDIEIWGVPEVLAKFEIERPEQV
IDFLGMMGDAADNIPGLPGVGEKTAKKFLKEYGSIENLLANTHQLKGAIKDKIEANKEKG
ILSKKLATILLDCPVTFNASTYELSKPDVEKTDELFQELEFRQMKTQFDKYFGTGKDYDE
IDTNENDNSQIQKKTVAKKTNEDQFDLFGFSDQESGEIKTDSHYAKLENTEHFYQSIEGD
FAVKLLLQNLLNQTSVCFDTETTGIDALNAQLVGMSFSFEKGKAFYVPFPENQEDAQVLA
DKFKPFFESESIEKIGQNIKYDLKILSHYGVQIKGKLFDTMIAHYLINPDMRHNMDVLSE
TYLKYSPKSIEDLIGKKGKNQKSMRDVSLEEIKEYAAEDADITYQLKQNFSPILDKAETK
KLFEEIEIPLIPVLAAMELEGINLDVPFLKSMSAEMALESNALEQKIYETAGEKFNLASP
KQLGDVLFDKMKIGGAKQKKTKTGQYATGEEILSYLANDNPIVKDILEWRQMVKLQSTYI
DALPNQVDKKTGRVHTDYMQTVAATGRLSSNNPNLQNIPVRTERGRLIRKAFIPRNENYT
LISADYSQIELRIIAALSGEENMIAAFQNNQDIHKSTAAKVFNVALEDVTKEQRSNAKTV
NFGIIYGVSAFGLSNQTSLSRKESAELIDAYYATYPKLKSYMSNQVDFARENGYVQTVLG
RRRYLKDINSANMMVKSGAERNAVNAPIQGSAADIIKIAMINIHKKLTQENWQSKMLLQV
HDELVFDVHNSELEKIQPMIKYEMENAFKIDVPLDVEIGIGKNWLEAH
NT seq 2847 nt   +upstreamnt  +downstreamnt
atgtcacaaaaacgcctttaccttctagatgcttacgctttaatatttcgtggttatttt
gcctttataaaaaacccaagaattaactcaaaaggcatggatacctctgccattatgggc
tttatgaatgccttaatggatgttataaaacgggaaaaaccagaccatttagccgtagct
ttcgacaaaggcggcagcacctaccgatacgaaatgtaccaagaatacaaagcgcatcga
gacgaaacgcccgaagccataaaaattgccgttccgtacatacaagatttactaaaagcc
atgcacattcctattattgaagtggcaggttttgaagcagatgatttaataggtacctta
gcaaaacaagccgaaaaagaagattttaaagtatatatggttacgccagataaggatttt
gcacaattggtttcagaaaatatttttatgtacaaacccgcgcgtatgggtaacgacata
gaaatttggggagttccagaagttttagcaaaattcgaaatagaaagacctgaacaagtt
attgattttctaggaatgatgggcgatgccgccgataacattccaggattaccaggtgtt
ggcgaaaaaacagcaaaaaaattcctaaaagaatacggatcgatagaaaaccttttagcc
aatacacaccaattaaaaggagccattaaagacaaaattgaagccaataaagaaaaagga
atcttatctaagaaactcgctacaatattactagattgtcctgtaaccttcaacgcttct
acttacgaattatctaaacctgatgtcgaaaaaacagacgaactgtttcaagaattagaa
tttaggcaaatgaaaacacagtttgacaaatattttggaacaggaaaagattatgacgaa
attgacactaatgaaaatgacaatagtcaaattcagaaaaaaactgtggctaaaaaaacc
aacgaagaccaattcgatttatttggtttttcggaccaagaaagtggcgaaataaaaaca
gactctcattatgcaaaattagaaaacacagaacatttttaccaaagtattgaaggcgat
tttgctgtaaaattactacttcaaaacctactcaatcaaacttcagtatgtttcgatact
gagactaccggaattgatgccttaaatgcccaattggttggaatgtcattttctttcgaa
aaaggaaaagctttttatgttccttttccagaaaaccaagaagacgcacaagttttggca
gacaaatttaaaccttttttcgaaagtgaaagcatcgagaaaattggtcaaaacatcaaa
tatgatttaaaaatcctttcgcattacggagttcaaatcaaaggaaaattattcgatacc
atgattgcacattatctgattaatccagatatgcgtcataatatggatgttttaagtgaa
acctatttaaaatattcgccaaaatcgattgaagatttaattggcaaaaaaggcaaaaat
caaaaatcgatgcgtgacgtttctttagaagaaattaaagaatacgctgccgaagatgct
gatattacctatcagttgaaacaaaattttagtccaattcttgacaaagcagaaaccaaa
aaactttttgaagaaatagaaattccgctaattcctgttttggcagccatggaattagaa
ggaattaatctcgacgttccgtttttaaaatcgatgtcggcagaaatggccctcgaaagc
aatgcgctagaacaaaaaatatacgaaaccgcaggggagaaatttaatttggcttcaccc
aaacaactcggcgatgttttatttgacaagatgaaaattggcggagcaaaacaaaagaaa
accaaaacagggcaatatgccactggcgaagaaattttaagctatttagccaatgacaat
ccaattgtaaaagacattttagaatggcgccaaatggtaaaattacaaagcacttatatt
gatgccttacccaaccaagtagataaaaaaacaggacgtgtacacacagattatatgcaa
actgttgctgcaactggtcgtttaagctctaacaatcctaacttacaaaatattcctgtg
cgaaccgaaagaggacgattaattcgaaaagcctttattcctcgcaatgaaaattacacg
ttaatttctgccgattattcgcaaatagagctacgaattattgccgctttatctggtgaa
gaaaacatgattgcagcttttcaaaacaaccaagacattcacaaaagcaccgctgcaaaa
gtatttaatgttgcattagaagacgttacaaaagaacaacgaagcaatgctaaaacggta
aatttcggaattatttatggcgtttcggcttttgggctttctaatcaaacctcactttca
agaaaagaaagcgcagagttaattgatgcctattatgcaacgtatccgaaactaaaatcg
tacatgtccaaccaagtagatttcgctagagaaaacggctatgtacaaactgttttggga
agaagacgctatttaaaagatattaattcggccaatatgatggtaaaaagtggtgccgaa
cgaaatgctgtaaacgcacctattcaaggctctgcggccgatattattaaaattgcgatg
attaatattcacaaaaaactaacccaagaaaactggcaatcgaaaatgttattgcaagta
catgacgaattggtttttgatgttcataattctgaattagaaaaaattcaaccgatgata
aaatacgaaatggaaaacgcctttaaaatagatgttccgttagatgttgaaattggaatt
ggcaaaaactggttagaagcgcattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (21)   

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