KEGG   Flavobacterium psychrophilum V4-24: IA04_06740
Entry
IA04_06740        CDS       T03660                                 
Name
(GenBank) pseudouridine synthase
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
fpw  Flavobacterium psychrophilum V4-24
Brite
KEGG Orthology (KO) [BR:fpw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:fpw03016]
    IA04_06740
Enzymes [BR:fpw01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     IA04_06740
Transfer RNA biogenesis [BR:fpw03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    IA04_06740
 Prokaryotic type
    IA04_06740
SSDB
Motif
Pfam: PseudoU_synth_1 DUF2344
Other DBs
NCBI-ProteinID: AIG36996
UniProt: A0A075S8A9
Position
1464219..1464971
AA seq 250 aa
MRYFIEFAYNGTQYHGWQYQPNATSVQETLNKVFSTLLQEKIDIMGAGRTDAGVHAKQMY
GHFDTDISIDNAKFIHKANSFLPKDIVIFNIIPVHNQAHARFDATSRTYNYHISTYKNVF
TNNLAWYSSKKIDVIAMNEAAKVLLKFTDFKCFSKTNTDVNTYNCKITEAFWSIEKEQLI
FTITADRFLRNMVRAIVGTLINIGLHKITIENFIQIIESQNRENAGFSVPAHGLFLTNIE
YPYIKKDESI
NT seq 753 nt   +upstreamnt  +downstreamnt
ttgagatattttatagaatttgcttataacggaacacaatatcatggctggcaataccaa
cccaatgcgacatcagtacaagaaactttaaacaaagttttttcgacactactacaagaa
aaaatagatattatgggtgctggccgtactgatgctggtgtgcatgccaaacaaatgtat
ggtcattttgatactgatattagtatcgataatgcaaaatttattcacaaagccaattca
tttttacccaaagacattgtgatttttaatataattcccgttcacaatcaagcccatgcc
agatttgatgctacttcacgaacatacaactatcatatttcgacttacaaaaatgttttt
actaataatttagcttggtattcatcaaaaaaaatagatgtcattgccatgaatgaagcg
gcaaaagtattattaaaatttaccgattttaaatgtttttcgaaaacaaatacagatgta
aatacttataactgcaagataaccgaagcattttggagcatcgaaaaagagcaactcatc
tttaccatcacggccgacagatttttaagaaatatggtacgtgccattgtaggaacactc
ataaatattggtttacacaaaataacaatcgaaaattttatacaaataatcgaatctcag
aacagagaaaacgcagggttttcggttccagcacatggtttatttctcacaaatatcgaa
tacccgtatataaaaaaagatgaaagcatttga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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