KEGG   Flavobacterium psychrophilum V4-24: IA04_08640
Entry
IA04_08640        CDS       T03660                                 
Name
(GenBank) 30S ribosomal protein S1
  KO
K02945  small subunit ribosomal protein S1
Organism
fpw  Flavobacterium psychrophilum V4-24
Pathway
fpw03010  Ribosome
Brite
KEGG Orthology (KO) [BR:fpw00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    IA04_08640
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:fpw03011]
    IA04_08640
Ribosome [BR:fpw03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Small subunit
    IA04_08640
  Bacteria
    IA04_08640
SSDB
Motif
Pfam: S1 PCB_OB Spt6_S1 DUF5666
Other DBs
NCBI-ProteinID: AIG37338
UniProt: A0A075S2N1
Position
complement(1872877..1874667)
AA seq 596 aa
MSETLKSQEQFLADFNWHNYSEGIDPVDAANLREFEELVAKTFIATDQEEVVEGVVVRIT
DRDVIVDINAKSEGVISLNEFRYNPSLKVGDKVEVLIDIREDKTGQLVLSHRKARTIKAW
DRVISANETGEIVNGFVKCRTKGGMIVDVFGIEAFLPGSQIDVKPIRDYDQYVNKMMEFK
VVKINHEFKNVVVSHKALIEADIEVQKKEIIGQLQKGQVLEGVVKNITSYGVFIDLGGVD
GLIHITDLSWSRINHPSEVLELDQKLNVVILDFDDEKTRIQLGLKQLNAHPWDALDANLA
IGDKVKGKVVVIADYGAFIEVAEGVEGLIHVSEMSWSTHLRSAQDFVKVGDIVEGVILTL
DRSERKMSLGIKQMTQDPWTDITSKYPVGSKHTGTVRNFTNFGIFVELEEGIDGLVYISD
LSWTKKIKHPSEFIAVGEKLDIVVLELDVDARKLSLGHKQTTANPWDKHEAAFAVGTIHN
GEIAEIVEKGATVDFGDDVVAFIPTRHLEKEDGKKLKKGDTADFKVIEFNKEFKRVVASH
TAIFREEEEKNVKTASDNNSNSNTSSSNNNASASTLGDNNDVLAALKAKMEQSEKK
NT seq 1791 nt   +upstreamnt  +downstreamnt
atgtctgaaacattaaaatcacaagaacagtttttagcagattttaactggcacaattat
tctgaaggaatagatccagttgatgcagcaaacttaagagaatttgaagaattagtagca
aaaacatttatcgcaacagaccaagaagaagttgtagaaggtgtagttgttagaattact
gacagagatgttatcgttgatattaacgctaaatctgaaggggttatttctttaaacgaa
ttccgttacaatccatcacttaaagtaggtgataaagtagaagttttaatagatattcgt
gaagacaaaacaggacaacttgttttatctcacagaaaagcacgtactatcaaagcttgg
gatagagttatttctgcaaatgaaactggcgaaatcgtaaacggttttgtaaaatgtaga
actaaaggtggtatgatcgttgacgtttttggtattgaagctttcttgccaggatctcaa
atcgatgtgaaaccaattagagattacgatcagtatgtaaacaaaatgatggaatttaaa
gtggtaaaaattaaccacgaattcaagaatgttgttgtatctcataaagcgcttattgaa
gcggatatcgaagttcagaaaaaagaaatcataggtcaattgcaaaaaggacaagtatta
gaaggtgttgttaaaaacattacttcttatggtgtgtttattgatttaggtggagttgat
ggattaattcacattactgacctttcttggtctagaattaatcacccaagtgaagtactg
gaattagatcaaaaattaaacgttgtaatccttgatttcgatgatgagaaaacaagaatt
caattaggtttaaaacaattaaacgcacacccttgggatgctctagatgctaacttagcc
attggagacaaagtaaaaggtaaagtagttgtaatcgctgattacggtgcatttatcgaa
gtggctgaaggtgttgaaggtttaattcacgtttctgaaatgtcttggtctacgcacttg
cgttctgctcaagatttcgtaaaagtgggtgatatcgttgaaggtgttatcttaactcta
gacagaagcgaacgtaaaatgtctcttggtatcaagcaaatgacgcaagacccttggaca
gatattacttctaaatacccagtaggttctaaacatacaggtactgtaagaaactttaca
aacttcggaattttcgtagaactagaagaaggaatcgacggattggtttatatctcagat
ttatcttggactaaaaaaatcaagcatccatcagaatttatcgctgtaggtgaaaaatta
gacatcgtagttcttgagctagatgtagatgctcgtaaactatctttaggtcacaaacaa
actactgcaaatccttgggacaagcatgaagctgcttttgctgttggaactatccataac
ggtgaaatagctgaaatcgttgaaaaaggtgctactgtagatttcggagatgatgttgtt
gcttttattcctacgcgtcaccttgaaaaagaagatggtaagaaattgaaaaaaggcgat
actgcagactttaaagttatcgaatttaacaaagaatttaaaagagttgtagcttcacat
actgctattttccgtgaggaagaagagaaaaatgtgaaaacagcttcagataacaattct
aactctaatacatcttcatctaacaacaatgcatctgcatctacgttaggagataataat
gatgtgttagctgctttgaaagctaaaatggaacaatcagagaaaaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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