KEGG   Flavobacterium psychrophilum FPG101: FPG101_04280
Entry
FPG101_04280      CDS       T03281                                 
Name
(GenBank) exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
fpy  Flavobacterium psychrophilum FPG101
Pathway
fpy03030  DNA replication
fpy03430  Mismatch repair
fpy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fpy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FPG101_04280
   03430 Mismatch repair
    FPG101_04280
   03440 Homologous recombination
    FPG101_04280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fpy03032]
    FPG101_04280
   03400 DNA repair and recombination proteins [BR:fpy03400]
    FPG101_04280
Enzymes [BR:fpy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FPG101_04280
DNA replication proteins [BR:fpy03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     FPG101_04280
DNA repair and recombination proteins [BR:fpy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     FPG101_04280
SSDB
Motif
Pfam: RNase_T GIY-YIG DEDDh_C RNase_H_2 GIY_YIG_2 DNA_pol_A_exo1 DUF2430
Other DBs
NCBI-ProteinID: AIN71214
Position
complement(943772..945133)
AA seq 453 aa
MYAILDIETTGGQFNEEGITEIAIYKFDGHQIVDQFISLVNPEIPIQPFVVKLTGINNAM
LVSAPKFHEVAKRIVEITKDCIIVAHNTVFDYRILRTEFSRLGYDFQAKTLCTVELAKIL
IPEQPSYSLGKLVRALGIPITNRHRAEGDALATVKLFKMLLDKDLEKIIVKEQIKTEITK
GIAPKLLNIIESLPNKTGVYYIHKENGTIIFIGKSRNIKKRVNQHFTGITKSALKIQQEV
FTVTYQETGSELIALLKETEEIKRNRPIYNRISPKTHFPVAIYCEKDANGYLNLKLQKFD
GRKKEITAYTSLQEGKNNLFRITSQYNLCQKLTGLYETKTHCFQQKINECDGACIGKITP
QEYNKRVQEFITKSTLENQSIIIIDSGRTTREHSAVLIENGVYKGYAFFDLNYQISNIQI
LKNLITPMPNNRDTRNIIQGYLRKNKVMKIMKF
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgtacgcaatactagacatagaaacaacaggaggacaattcaatgaagaaggaattacc
gaaatcgccatctataaatttgatggtcatcaaatagtagaccaatttattagtttagta
aatcctgaaatcccaattcaaccgtttgtagtaaaacttacgggaataaataatgctatg
ttggtatctgcacccaagtttcacgaagtagccaaacgcattgtagaaatcacaaaagat
tgtataattgttgcacacaataccgttttcgattaccgaattcttcgcacagaatttagc
cgtctaggttacgattttcaagcaaaaacgctatgcacagtcgaactagctaaaatacta
attccagaacaaccctcatatagcttaggaaaattagttcgagcactaggaatcccaata
actaacagacatcgtgccgaaggagatgcactagcaacagtcaaattatttaaaatgctg
ttagacaaagatttggaaaaaatcattgtaaaagagcaaattaaaaccgaaattaccaaa
ggaattgcaccaaaattattaaatattatcgaatccctgcccaacaaaacaggcgtttac
tacattcacaaagaaaacggaactattatttttattggcaaaagcagaaatatcaaaaaa
agagtaaaccagcattttacaggaatcacaaaaagtgccctaaaaatacaacaagaagtt
tttaccgttacttaccaagaaactggaagcgaactcatagcgctactaaaagaaaccgaa
gaaataaaaagaaaccgacctatttataacagaatatcgcctaaaacccatttcccagta
gccatatattgcgaaaaagatgccaatgggtatttgaatctaaaattacaaaaattcgac
ggtcgaaaaaaagaaatcacagcctacacaagccttcaggaaggaaaaaacaatttattc
agaataacatcacaatacaatttgtgccaaaaattaactggtttatacgaaacaaaaact
cactgttttcagcagaaaataaacgaatgcgatggcgcttgtataggcaaaattacgcca
caagaatacaacaaacgagtgcaagaatttattacaaaaagcaccctcgaaaaccaaagc
atcatcattatagacagcggtagaaccaccagagaacacagtgctgttctcatagaaaat
ggtgtatataaaggctatgcttttttcgatttaaattatcaaattagcaatatacaaata
ctaaaaaacctcattacaccaatgcccaacaaccgtgacacccgaaatatcatacaaggc
tatttacgtaaaaacaaagtgatgaaaatcatgaaattttaa

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