KEGG   Francisella philomiragia GA01-2794: LA55_340
Entry
LA55_340          CDS       T03620                                 
Name
(GenBank) hypothetical protein
  KO
K03655  ATP-dependent DNA helicase RecG [EC:5.6.2.4]
Organism
fpz  Francisella philomiragia GA01-2794
Pathway
fpz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fpz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    LA55_340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fpz03400]
    LA55_340
Enzymes [BR:fpz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LA55_340
DNA repair and recombination proteins [BR:fpz03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     LA55_340
SSDB
Motif
Pfam: DEAD Helicase_C ResIII RecG_wedge tRNA_anti-codon SNF2-rel_dom AAA_30 RecG_dom3_C AAA_22 Helicase_RecD IstB_IS21 ATPase nSTAND3 BrxC_BrxD AAA_10 TsaE Flavi_DEAD SLFN-g3_helicase AAA_16 SecA_DEAD
Other DBs
NCBI-ProteinID: AJI54241
UniProt: A0A0B6D5P6
Position
326130..328169
AA seq 679 aa
MQFNEVKGVGEATVKALAKYNLYNPDDLLSIFPKEYKDTRFVSTISSLVADKKYLIEGRI
TNLTYKKFGKKFLRFIVNDETGICTVVMFKFYPNQIVALENAEYVRCYGKVDLSLNPQMV
HPEWAVIKDGVCAIKKEFSPVYRLKKVSDKVVSRIILSCLKSKSVADTLPRQLLRGFGLM
SFSNALYYVHALTDSIDDKLINIARSSIKFEEMLAYKLAEESIRKSITNSSAPRLSLEKS
QQTEFYKKLPYQLTQAQQRTITEILADISQSNAMIRLLQGDVGAGKTIVAAMAVYNAVKS
GYQAVVMAPTEILAEQHYSFFASYMADFDIEVVPLLGKLTAKQTRESLEVIKSKKDCVIV
GTHAVFQERVEYCNLGLVVVDEQHRFGVEQRLALINKSSLNAKHLVPHQLIISATPIPRT
LAMTLYGNLQLSILDELPPNRKPIVTTVLNRAKKQSLIGKVKEAVSRGEQVYWVCPLVEE
SENMDFLQDVKTLHKELEEVLGKENVGLVYGSMKSKDKIQEMSDFKAKKYKVLVATTVIE
VGVDVPNASIMIIDNAERLGISQLHQLRGRVGRGAKESYCILLYSERISEVGKKRLSLVR
ESQDGFYLAEKDLEIRGAGDILGKEQSGVSTFKTFDINEYYDNYDKISSATAIVESEYPH
LKKKLVDKWFKQRVNYVDV
NT seq 2040 nt   +upstreamnt  +downstreamnt
atgcaatttaatgaagtcaaaggtgttggtgaggcaactgttaaagcgctagctaaatat
aatctgtataatccggatgaccttttgtcaatattccctaaagagtacaaagatactcgt
tttgtcagcaccataagttctttggtggcagataagaagtatctcattgagggtagaata
accaatttaacatacaagaagtttggtaagaaattcttacgctttatagtaaatgatgag
actggaatttgtactgttgtaatgtttaaattttaccctaatcaaatagtcgcacttgaa
aatgctgaatatgtgcgctgttatggtaaagtcgacttatcgttgaatccacaaatggtt
catccagaatgggcagttataaaagatggtgtgtgtgctatcaaaaaagagttttcacca
gtttatcggttaaaaaaggtctctgataaagtggtgtctagaataattttatcttgcctt
aaaagtaaaagtgttgcagataccttaccaagacagctattgcgtggatttggtttgatg
agctttagtaatgccctgtattatgtccatgctcttacagattctatagatgacaagctt
ataaatattgctagatcttctataaagtttgaagaaatgcttgcctacaaacttgctgaa
gagagtattcgtaaaagcataacaaatagtagtgctccaagattatctttagaaaagtct
cagcaaactgaattttataaaaagctaccgtatcaattaacccaagctcagcaacgtaca
atcacagagattttagcggatataagtcaatcaaatgcgatgataaggcttctgcaaggt
gatgttggcgctggtaaaacaattgtggcagctatggctgtatataatgcagttaagtct
ggatatcaagcagttgtgatggcgcctacagagattttggctgagcaacattatagtttt
tttgcatcatatatggctgatttcgatattgaggttgtgccactattaggtaaattaact
gcaaagcaaactagagaaagtttagaagttattaagtctaaaaaagattgcgttattgtc
ggaactcatgctgtgtttcaagagcgtgttgaatattgtaatttgggtctggtagttgtt
gatgaacaacataggtttggtgttgagcagcgcttagctttaatcaacaaatcatctcta
aacgctaagcatttggtgcctcatcagctaataatttcagctacacctattcctaggact
ctagcgatgactttgtatggaaatttgcaattatcaatacttgatgagttaccgcctaat
cgtaagcctatagtaacaacagtcttaaatagagctaaaaaacaaagtttgataggtaag
gttaaagaagcagtatctcgtggtgaacaagtatattgggtttgtcctttggtggaagag
tctgaaaatatggactttttgcaggatgttaaaactttgcataaagaacttgaagaagtg
ttaggtaaggaaaatgtgggtcttgtatacggcagtatgaaatcaaaagataaaatacaa
gagatgagtgactttaaagccaaaaagtacaaggtattagttgccactacagtgattgag
gttggagtagatgtgccaaatgcgagtattatgattattgataatgccgaaagattgggc
atatctcagcttcatcagctaagaggaagagttggtagaggggcaaaggagagttattgt
atactgctatatagtgagaggataagtgaagttggcaaaaaaagactatcgcttgtaaga
gagtcgcaagatggtttttatttggctgagaaagatctcgagatacgcggagcgggagat
atcttaggtaaagagcagtcaggggtgtcaacatttaagacttttgatataaatgagtat
tatgataattatgataaaatatctagtgctacagctatagtagaaagtgaatatccacat
ctaaaaaagaaattggtggataagtggtttaagcaaagagtaaattacgtggatgtgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (20)   
   Pfam (20)   
All databases (30)   

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