KEGG   Frankia casuarinae: Francci3_3510
Entry
Francci3_3510     CDS       T00320                                 
Name
(GenBank) SOS-response transcriptional repressor, LexA
  KO
K01356  repressor LexA [EC:3.4.21.88]
Organism
fra  Frankia casuarinae
Brite
KEGG Orthology (KO) [BR:fra00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:fra01002]
    Francci3_3510
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fra03400]
    Francci3_3510
Enzymes [BR:fra01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.21  Serine endopeptidases
    3.4.21.88  repressor LexA
     Francci3_3510
Peptidases and inhibitors [BR:fra01002]
 Serine peptidases
  Family S24: LexA family
   Francci3_3510
DNA repair and recombination proteins [BR:fra03400]
 Prokaryotic type
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    Francci3_3510
SSDB
Motif
Pfam: Peptidase_S24 LexA_DNA_bind MarR_2 HTH_IclR HTH_27 HTH_24 Herpes_capsid HTH_36 Sigma70_r4 MarR CobN-Mg_chel Fe_dep_repress HTH_5
Other DBs
NCBI-ProteinID: ABD12863
RhizoBase: Francci3_3510
UniProt: Q2J779
Position
4194229..4194999
AA seq 256 aa
MTSQGRGTRRGGTRGNVRAFPEGPTDAGLTPRQRRVLEVIRAAVERRGYPPSVREIGEAV
GLTSTSSVAHQLKVLEEKGYLRRDPNRPRAMEVLTVEHPRQRADVGAGATTVAGTIPIVG
EAAPGTTEGSKSDAAYVPVLGRIAAGGPILAEQAVEDVFPLPREIVGEGTLFLLRVVGDS
MINAAICDGDWVVVRQQPVADNGEIVAAMIDGEATVKRLRVRDGKIWLHPENSAFADIPG
EDATILGRIVAVLRRV
NT seq 771 nt   +upstreamnt  +downstreamnt
atgactagccaaggcaggggtacgcgccggggcggaacccgcggcaacgtgcgagccttt
cccgaaggccccacggacgcgggcctgaccccccggcagcgcagggtgctggaggtcatc
cgggccgcggtggagcggcgcggatatccgcccagcgtgcgggagatcggtgaggcggtc
ggcctcaccagcaccagtagtgtggctcaccagctcaaggtgctcgaggagaagggctac
ctgcggcgggacccgaaccgcccgagagcgatggaggtgctgaccgtcgagcacccccgg
caacgcgcggatgtgggcgcgggcgcgacgacggtggcgggcacgattcccatcgtcggt
gaggcggcgccgggcaccaccgaaggaagcaagtcggacgcggcctacgtgccggtgctg
ggccggatcgccgccggtggcccgatcctggccgagcaggcggtcgaggacgtcttcccg
ctacccagggagatcgtcggcgagggcactctgttcctgctccgggtcgtcggcgactcg
atgatcaacgcggcgatctgcgacggtgactgggtggtcgtccgccagcagccggtcgcg
gacaacggggagatcgtcgccgcaatgatcgacggggaggcgacggtcaagcgtctgcgg
gttcgggacggcaagatctggctacatccggagaactcggccttcgccgacatccccggt
gaggatgcgaccatcctcggccggatcgtggctgtgctccgcagggtttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (13)   
   Pfam (13)   
All databases (29)   

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