KEGG T00608: Franean1

Frankia sp. EAN1pec: Franean1_0984

Entry

Franean1_0984 CDS T00608

Gene name

kgd

Definition

alpha-ketoglutarate decarboxylase

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

fre Frankia sp. EAN1pec

Pathway

fre00020	Citrate cycle (TCA cycle)
fre00310	Lysine degradation
fre00380	Tryptophan metabolism
fre01100	Metabolic pathways
fre01110	Biosynthesis of secondary metabolites
fre01120	Microbial metabolism in diverse environments

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:fre00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:fre00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:fre00380]

SSDB

Motif

Pfam:

E1_dh Transket_pyr 2-oxoacid_dh

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

RhizoBase:

UniProt:

Position

complement(1147593..1151315)

AA seq 1240 aa
MTAPTVPASEPDFGPNEWLVFEIYQQYLEDPESVSAEWREFLSDYRPANPSAPHVAGTLV
AGDGQAAAATDPGSPRPPVPSAPSPAPGVPAAAAAPAQAQATAPAAAPVAKPAVARPAAA
GAQTPLRGASARVVSNMETSLHIPTATSVRAVPAKLLADNRIVINRHLARSSGGKISFTH
VIGYAMVKALVDHPAMNASYAEVGGKPTLVQPEHVNLGLAIDLVTPKGRQLVVAAVKKAE
TLDFSQFWLAYEDLVRRARTNKLTMDDFAGVTISLTNPGGIGTVHSVPRLMEGQGTIIGV
GAMEYPAEFQGASQQTLSKLAISKIMTLTSTYDHRIIQGAQSGEYLRRIHELLLGADGFY
DEIFHSLRVPYVPVRWLPDISAHHEGDLDHGARVLELIHAYRVRGHLMADTNPLEFAIRS
HPDLDIIGHGLTLWDLDREFPVGGFAGQRTMSLRDVLGVLRDSYCRRVGIEYMHIQEPAE
RTWIQARVERSAERPDPAEQLYVLERLGAAEAFESFLQTKYVGQRRFSLEGAESTIPLLD
EVLSRAAEAAMDEVVIGMAHRGRLNVLANIVGKSYRQIFDEFEGYVDPQTAHGSGDVKYH
LGADGVYTDQDGRTVPVSVVANPSHLEAVDAVLEGVARAKQDVLDKGFSGYTVLPVLIHG
DAAFAGQGVVAETLNLSQLRGYRTGGTVHVVINNQVGFTTSPTSSRSSVYATDVARMVQA
PIFHVNGDDPEACVRVATLAFAYRQEFNKDVVIDLVCYRRRGHNEMDEPSFTQPLMYDTI
ASKRSVRKVYTEALIGRGDITRDEAEHAMKSYRAELEKAFAETRETTTRPTPQPRIVTTP
AEAAAAAAVTTAVSPEAVKKVVDTQVSLPDGFVMHPRLRPQIERRAQMVETASIDWALAE
TIAFGTLLLNGVSVRLTGQDSRRGTFGQRHSVLVDRYTAEEHTPLRTLREEADSQVGTFY
TYDSLLSEFAAMGFEYGYSVARSDTLVLWEAQFGDFANGAQSIIDEFISAGEAKWGQRSS
LTLLLPHGYEGQGPDHSSARIERFLSLCADGNMTVSAPSSPASYFHLLRRQALSPVRRPL
IVFTPKSMLRLKAAASSVEELTGGSWQPIIDDAAVSDPASVKRVLLSAGKVYYDLAAARV
KRNDAQRFALLRVEQLYPTPGPELTALLRRYPNVTDLVWVQEEPANQGAYPHMALNLPES
LPDGLRLRRVSRRAAAAPAGGSSSVHEREQAALVEAAFGD

NT seq 3723 nt +upstreamnt +downstreamnt
gtgacagcaccgacggtacccgcgtcagaacctgacttcggccccaacgagtggttggtc
ttcgagatctaccagcagtatctcgaggacccggagagcgtctccgccgaatggcgtgag
ttcctctccgactaccgtcccgcgaacccgtccgccccgcatgtggcgggcacactggtc
gccggcgacggacaggcggccgccgccaccgaccccggttcaccgcgcccgcccgtgccc
tccgcgccctccccggcaccgggggtgcccgcagccgcggcggctccggcgcaggcccag
gccacggcgccggctgctgcgcccgtggcgaagccggcggtggcgaggcccgccgcagcc
ggggcccagaccccgctgcgcggcgcgtccgcccgggtggtctcgaacatggagacctcg
ctgcacatcccgacggcgacctccgtgcgcgccgtgccggcgaagctgctggccgacaac
cggatcgtcatcaaccggcatctcgcccggtccagcggcggcaagatctccttcacccat
gtcatcggctacgccatggtcaaggcgctggtcgaccacccggcgatgaatgcttcgtac
gccgaggtcggcggcaagcccaccctggtgcagcccgagcacgtcaaccttggtctcgcc
atcgacctggtgacgcccaagggccgccagctcgtcgtcgccgccgtgaagaaggccgag
acgctcgacttcagccagttctggctggcgtacgaggatctcgtccgccgtgcacggacg
aacaagctgacgatggacgacttcgccggcgtcacgatcagcctgaccaaccccggcggc
atcgggacggtgcactccgtcccgcggctcatggagggccagggcacgatcatcggcgtc
ggggccatggagtacccggccgagttccagggcgcgtcgcagcagaccctgtcgaagctc
gccatctccaagatcatgactctgaccagcacgtacgaccaccggatcatccagggcgcg
cagtccggagagtacctgcggcgcattcacgagctgctgctcggcgccgacgggttctac
gacgagatcttccactcgctgcgcgtgccctacgtcccggtgcgctggctgcccgacatc
tccgcgcaccacgagggcgacctcgaccacggcgcgcgggtgctcgagctcatccacgcc
taccgggtgcgcgggcacctgatggccgacacgaacccgctcgagttcgccatccgcagc
caccccgacctcgacatcatcgggcacgggctgaccctgtgggacctcgaccgggagttc
cccgtcggcgggttcgccggccagcgcacgatgtcgctgcgtgacgtgctcggcgtgctg
cgcgactcgtactgccgccgcgtcggcatcgagtacatgcacatccaggagcccgcggag
cgcacctggatccaggcccgggtcgagcgctcggccgagcggcccgacccggccgagcag
ctctacgtgctggagcgcctcggcgccgccgaggcgttcgagtccttcctgcagacgaag
tacgtcggccagcggcggttctccctcgagggcgccgagtcgacgatcccgctgctcgac
gaggtcctcagccgggcggcggaggccgccatggacgaggtcgtcatcggcatggcccac
cgcgggcggctcaacgtgctggcgaacatcgtcggcaagtcctaccggcagatcttcgac
gagttcgagggctacgtcgacccgcagaccgcccacggctcgggagacgtgaagtaccac
ctgggtgccgacggcgtctacaccgaccaggacggccgcaccgtccccgtgtcggtggtg
gcgaacccgtcccacctcgaagccgtcgacgcggtgctcgagggcgtggcccgcgccaag
caggacgtgctggacaagggcttcagcggctacaccgttctgccggtgctgatccacggt
gacgccgcgttcgccggccagggtgtggtcgccgagacgctgaacctctcccagctgcgc
ggctaccgcaccggcggcaccgtgcacgtggtcatcaacaaccaggtcggcttcaccacg
tcgccgacgtccagccgctcctcggtctacgccaccgacgtggcgcgaatggtgcaggcg
ccgatcttccacgtcaacggggacgaccccgaggcgtgcgtccgggtcgccacgctggcc
ttcgcctaccggcaggagttcaacaaggacgtcgtcatcgacctcgtctgctaccggcgc
cgcggccacaacgagatggacgagccgtccttcacccagccgctgatgtacgacaccatc
gcttccaagcgctcggtgcgcaaggtctacaccgaggcgctgatcggccgtggggacatc
acccgcgacgaggccgagcatgcgatgaagagctaccgtgccgagctggagaaggcgttc
gccgagacccgggagaccacgacccggcccacgccgcagccacggatcgtgaccacaccg
gcggaggcggccgcggccgccgcggtcaccaccgcggtgtcgcccgaggcggtcaagaag
gtcgtcgacacccaggtcagcctgccggacgggttcgtcatgcacccgcgcctgcgcccg
cagatcgagcgccgggcgcagatggtcgagaccgcctccatcgactgggccctggccgag
accatcgccttcgggacgctgctcctcaacggcgtctcggtgcggctcaccggccaggac
agccggcgcggcacgttcggccagcggcactccgtgctggtcgaccgctacaccgccgag
gagcacaccccgctgcgcaccctgcgcgaagaggctgactcgcaggtgggcaccttctac
acctacgactcgctgctctccgagttcgcggcgatgggcttcgagtacggctactcggtg
gcccgctccgacaccctggtgctgtgggaggcgcagttcggcgacttcgccaacggcgcg
cagtcgatcatcgacgagttcatctcggccggtgaggccaagtggggccagcgctcgtcc
ctgacgctgctgctcccgcacggctacgagggtcagggccccgaccactcctccgcccgc
atcgagcgcttcctctcactgtgcgcggacggcaacatgaccgtctcggcgccgtccagc
ccggccagctacttccacctgctgcgccggcaggcgttgtcgcccgtgcgccggccgctg
atcgtcttcacgccgaagtcgatgctgcggctcaaggcggcggcgtcctccgtcgaggag
ctcaccggcggttcctggcagccgatcatcgacgacgcggcggtcagcgacccggccagc
gtgaagcgcgtgctcctgtccgccggcaaggtctactacgacctggccgccgcgcgggtg
aagcgcaacgacgcgcagcggttcgccctgctccgcgtcgagcagctctacccgaccccc
gggccggagctcaccgcgctgctgcgccgctacccgaacgtgaccgacctcgtctgggtc
caggaggagccggcgaaccagggcgcctacccacacatggcgctgaacctgcccgagtcg
ctgccggacggcctgcggctgcggcgggtctcgcggcgggccgcggccgcccccgcgggc
ggctcgtcctcggtgcacgagcgcgagcaggcggcgctggtcgaggccgccttcggggac
tga

All links

Pathway (6)   
   KEGG PATHWAY (6)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-FRE (1)   
   OC (1)   
   RHIZOBASE-FRE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (36)   

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