KEGG   Frankia sp. EAN1pec: Franean1_1140Help
Entry
Franean1_1140     CDS       T00608                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
fre  Frankia sp. EAN1pec
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:fre00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Franean1_1140
Enzymes [BR:fre01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Franean1_1140
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Franean1_1140
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
RhizoBase: 
UniProt: 
Position
1360011..1360886
Genome map
AA seq 291 aa AA seqDB search
MPELPEVEVVRRGLERGVVGRTVAEVEVHHLRAVRRHLAGADHFAASLVGQTVATARRRG
KYLWLGLTPSEPGGPAVGDALLGHLGMSGQLLVVPADSPDQVHLRVRFRFTDEGRELRFV
DQRTFGGLAVVSGGAELPAPIAHIAPDPLSVDFDPERFADALRRRRTGLKRALLDQTLIS
GVGNIYADEGLWAARLHYARPTETVTRAEALRLLDAVRTVMTAALAAGGTSFDRLYVSTE
GVSGLFERSLEVYGRGGQACSRCASTIRRDAFMNRSSFSCPACQPRPRRVR
NT seq 876 nt NT seq  +upstreamnt  +downstreamnt
atgcctgagctgcccgaggtcgaggtcgtccgccggggcctcgagcgcggggtggtcggc
cgcactgtcgccgaggtggaggtccatcacctgcgggcggtccgccgccatctcgccggg
gccgaccacttcgccgcctcgcttgtcgggcagacggtggccacggcgcgccggcgcggc
aagtacctgtggctcgggctcacgccgtctgaaccgggcggcccggcggtcggtgacgcg
ctgctcggtcatctcgggatgagcggccagctcctcgtggttccggcggacagcccggac
caggtacacctgcgggtccgtttccggttcaccgacgagggccgcgagctgcgcttcgtg
gaccagcggacgttcggtggtcttgctgtggtctcgggcggggcggagctgcctgccccg
atcgcccacatcgcgcccgacccgctctccgtcgacttcgacccggagcgtttcgccgac
gcgctgcgccgccggcgcaccggcctcaagcgcgccctgctcgaccagacgctgatcagc
ggcgtgggcaacatctacgcggacgagggcttgtgggccgcgcgcctgcattacgcccgc
ccgaccgagacggtgacccgcgccgaggcgctgcggctgcttgacgcggtccgcacggtg
atgacggcggcgctggccgccggcggtacctccttcgaccggctctacgtctcgaccgag
ggcgtcagcgggctgttcgaacgctcgctggaggtctacggacgcggcggccaggcgtgc
tcccgctgcgcctcgaccatccgccgggacgcgttcatgaaccgctcgagcttcagctgc
ccggcgtgccagccccggccccgccgggtccggtga

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