KEGG T00608: Franean1

Frankia sp. EAN1pec: Franean1_3257

Entry

Franean1_3257 CDS T00608

Definition

glycoside hydrolase family protein

Orthology

K01190

beta-galactosidase [EC:3.2.1.23]

Organism

fre Frankia sp. EAN1pec

Pathway

fre00052	Galactose metabolism
fre00511	Other glycan degradation
fre00600	Sphingolipid metabolism
fre01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Galactose metabolism [PATH:fre00052]
Metabolism; Lipid metabolism; Sphingolipid metabolism [PATH:fre00600]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:fre00511]

SSDB

Motif

Pfam:

Glyco_hydro_2_C Bgal_small_N Glyco_hydro_2_N Glyco_hydro_2

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

RhizoBase:

UniProt:

Position

complement(3854969..3858022)

AA seq 1017 aa
MTGTDFTAVPWEDSGFQALGRLPMHSIRRPAEVELDGVWDFQLLDSPTAPPGAEWKRADV
PGLWTMSEAGDPAHYTNVRMPFDETPPRIPARNPTGVYRRSFELRPAAGRRAILHVGAAE
GLLRVFVNGRAIGVSTDSHLAAEFDITEACVAGGRDRHTVELVISKWSSVSYLEDQDHWW
QSGITRSVYVYTLPEIRLADLAVVADFDPEARRGTLRLEVSTAGLDHLPELAWTVRVDVL
GRRSTLPVTPCSPAPGLPPPWDDRSVRPEPRVPADFMSLVSQIAADAPIPPRWSAAVPSL
RRSLAPRRPAGTATLHLDGLEVEPWSAESPHLEDLVVALVSPGGEVVDETRTRIGFRRVR
IEGRDLLVNGGRILIQGVNRHDTDARTGRVLSARTMLAELSLLKRFNVNAIRTSHYPNDP
RLLELCDELGFYVVDEADIEAHAFANAICDDPRYLPAFLDRVSRMTLRDRNHPSVIVWSL
GNETGYGANHDAAAGWLRRFDPTRPLHYEGAIALDWHGGRAATDIVCPMYPSFEALAAFS
ADPRADRPVILCEYAYSQGNSTGGLAEYWEMFETLPGLQGGFIWEFKDHSLDPAGDGGYR
YGGDFGDVPHDGATLVNGIVFPDLTPQPALYEARGLFSPVRIVSDAAAALAGAIGIRNRQ
SFNDLSAYVLELQVENDRSTDPVTVDVPDVAPGATGTIELPDPIRKLLGSAPPLALTLTV
RTRQGARWAPAGTVVAAHQITFPRPPVALLSAPVPDALRVDQDGSVVHPLLRRAPALCLW
RAVTDNDKSFSLDQRFVRSGFFRLTPGAVTAEADGGSLTITTAYATAFGTEVTHRRVISA
LAEHDYRFDEHVQLPADTEDALRVGVEFELTPGFDDARWVGLGPWENYPDRRSSALLGSW
RERIDDLAVPYLVPQENGGRGAVSELCLSGPAGTVRTFHPTPVQMAVGRHRVDQLEAAAH
WWELPPSDVTVVHLDVAHRGVGTAQLGPDTRPRHRLTDHEYTWTWRLRLESAAGAAV

NT seq 3054 nt +upstreamnt +downstreamnt
atgactgggaccgacttcaccgcagtgccgtgggaggacagcggcttccaggccctgggt
cggctgccgatgcattcgatcaggcgacccgccgaggtcgagctggacggggtgtgggac
ttccagttgctggacagcccgaccgcgccccccggtgcggagtggaagcgcgccgacgtc
cccggcctctggacgatgagcgaggccggcgacccggcgcactacacgaatgtccggatg
ccgttcgacgagacgcccccgcgcatcccggcgcgcaaccccaccggggtctaccggcgt
tccttcgagctgcgccccgccgcgggccgccgggcgatcctgcatgtcggggcggcggag
ggcctgctgcgggtgttcgtgaacgggcgcgcgatcggcgtctccactgactcgcatctc
gccgccgagttcgacatcaccgaggcctgtgtcgccggcggacgggaccggcacacggtg
gagctggtgatctccaagtggtcgtcggtctcctatctcgaggaccaggatcactggtgg
cagtcgggtatcacccggtcggtgtacgtctacacgctcccggagatccggctggccgac
ctggctgtcgtcgccgacttcgatcccgaggcgcgtcgcgggacgctgcgcctggaggtg
tcgaccgccggtctcgaccacctgccggaactcgcgtggaccgtgcgggtcgacgtcctg
gggcgccgatcgacgctgccggtcaccccctgctccccggctccgggactcccaccgccc
tgggacgaccggtcggtccggcccgagccccgcgtcccggccgacttcatgagcctggtc
tcccagatagccgcggacgccccgatcccgccgaggtggtcggcggcggttccgtccctg
agacgcagcctcgcgccccggcggcctgccggcaccgccacgctccacctcgacggcctc
gaggtggagccgtggtcggccgagtctccccatctggaggatctcgtcgtcgcgctcgtc
tcccccggcggcgaggtcgtggacgagacccgcaccaggatcggcttccggcgggtccgg
atcgagggccgggatctgctggtcaacggcggacggatcctcatccagggggtgaaccgc
cacgacacggacgcccgcaccggccgggttctctcggcgcggacgatgctcgcggagctc
tccctgctcaaacggttcaacgtgaacgcgatccgcacctcgcactatcccaacgacccg
cgcctgctggagctgtgtgacgagctcggcttctacgtcgtcgacgaggcggacatcgag
gcgcacgccttcgccaacgcgatctgcgacgatccgcgctacctgccggctttcctcgac
cgggtgtcgcggatgacgctgcgcgaccgcaaccatccgagcgtgatcgtctggtcgctc
ggcaacgagacgggctacggagcgaaccacgacgccgccgccggatggctgcgccgcttc
gacccgacccgccccctgcactacgagggggcgatcgccctcgactggcacggcggccgg
gccgcgaccgacatcgtctgcccgatgtacccctcgttcgaggcgctggccgccttctcc
gccgatccgcgggccgaccgtccggtgatcctgtgcgagtacgcctactcgcaggggaac
tcgaccggagggctggccgagtactgggagatgttcgagacgctgcccggcctgcagggc
gggttcatctgggagttcaaggaccattccctcgatcccgcgggcgacggcgggtaccgc
tacggcggcgacttcggggacgtcccccacgacggcgcgaccctggtgaacggcatcgtc
tttcccgacctcaccccccagcccgcgctgtacgaggcacgcggcctgttcagcccggta
cggatcgtctcggacgccgcggccgcgctcgcgggggcgatcggcatccgcaaccgccag
tccttcaacgacctgagcgcctacgtcctggaactacaggtggagaacgaccggtcgacg
gacccggtcaccgtcgacgtgccggacgtcgcgcccggggcgaccgggaccatcgagctg
cccgacccgatccgcaagctgctcgggtccgcaccgccgttggccctgaccctgaccgtg
cggaccaggcagggcgcgcggtgggcaccggcgggcaccgtcgtcgccgcacaccagatc
accttcccgcggccgccggtcgccctgctgtccgccccggttcccgacgccctccgcgtc
gaccaggacgggtccgtcgtacaccccctgctgcggcgcgccccggcactgtgcctgtgg
cgggcagtcaccgacaacgacaagtccttctccctcgaccagcgcttcgtccgctccggc
ttcttccgcctcacccccggggcagtcacggccgaagcggacgggggcagcctgacgatc
accaccgcctacgccaccgcgttcggcaccgaggtgacgcaccgccgcgtcatcagcgcg
ctggccgagcacgactaccggttcgacgagcacgtccagctgcccgcggacaccgaggac
gcgctgcgggtcggcgtggagttcgagctcacgcccggtttcgacgacgcccgctgggtc
gggctcgggccgtgggagaactaccccgaccgccgctcctccgcgctcctcggctcctgg
cgggaacgcatcgacgacctggccgtgccctacctcgttccgcaggagaacggcgggcgc
ggggcggtgagcgagctgtgcctgagcggtccggccggcaccgtgcgcaccttccacccg
acgccggtgcagatggccgtcggccggcatcgcgtcgatcagctcgaggccgcggcccac
tggtgggagctcccgcccagcgacgtcaccgtcgtccacctcgacgtggcgcaccggggt
gtcggcaccgcccagctgggcccggacacccgtccccgtcaccgcctcaccgaccacgag
tacacatggacgtggcggctacggctcgagtcggccgccggggccgcggtctga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-FRE (1)   
   OC (1)   
   RHIZOBASE-FRE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (34)   

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