KEGG   Frankia sp. EAN1pec: Franean1_3662Help
Entry
Franean1_3662     CDS       T00608                                 

Definition
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
fre  Frankia sp. EAN1pec
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:fre00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Franean1_3662
Enzymes [BR:fre01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Franean1_3662
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Franean1_3662
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
RhizoBase: 
UniProt: 
Position
4338709..4339527
Genome map
AA seq 272 aa AA seqDB search
MPEGHTVHRLAAVHQRMFRGRPVTVSSPQGRFVDGARMLDGQVLAEAEAHGKHLLLEFGD
EQILHIHLGIYGTYALGPGPAPVPTGAVRLRLTADTGYADLRGPNACELLAPGEVKVLRD
RLGPDPLRADADPALAWRRIERSRTPIAVLLLDQKVVAGPGNIYRAEVLFRAGIHPLLPG
RELARDQWAAIWADLVTLMADGVRTGRIDTVRPAHTPEAMGRPPRVDDHGGEVYVYRRTG
QPCLICAAEVRTVQLAGRNLFWCPACQPPVPG
NT seq 819 nt NT seq  +upstreamnt  +downstreamnt
atgcccgaaggtcacactgtgcacaggttggccgccgtccaccagcggatgttccgtggc
cggccggtgaccgtgtcgagcccgcaaggccggttcgtcgacggcgcgcgcatgctggac
gggcaggtgctggccgaggctgaggcgcacggcaagcacctgctgctggagttcggcgac
gaacagatcctccacatccacctgggtatctatggcacctacgcactcggtcccggcccg
gcgcccgtgccgacgggagccgtccggctgcggctcacggccgacaccgggtacgccgac
ctgcgcggtcccaatgcctgcgagctgctggcacccggcgaggtgaaggtgctgcgtgac
cggctgggccccgatccgctgcgtgccgacgccgatccggcgctggcctggcgccggatc
gagcgcagccgcaccccgatcgccgtgctcctgctggaccagaaggtcgtcgccgggccg
gggaacatctaccgggccgaggtgctgttccgcgccgggatccacccgctgctgccgggc
cgggagctggcccgcgaccagtgggcggcgatctgggccgacctggtcacgctgatggca
gacggggtgcggacgggccggatcgacaccgtgcgccccgcgcacaccccggaggcgatg
ggccgcccgccgcgcgtcgacgatcacgggggagaggtctacgtgtaccgcaggacgggc
cagccctgcctgatctgcgccgccgaggtgcgcacggtgcagctggccggccgcaacctg
ttctggtgccccgcctgccagccacccgttccgggctga

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