KEGG   Frankia sp. EuI1c: FraEuI1c_0093Help
Entry
FraEuI1c_0093     CDS       T01354                                 

Definition
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
fri  Frankia sp. EuI1c
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:fri00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    FraEuI1c_0093
Enzymes [BR:fri01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     FraEuI1c_0093
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     FraEuI1c_0093
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(110573..111451)
Genome map
AA seq 292 aa AA seqDB search
MPELPEMEALASVLRDRAVGKVVTRAEPVAINALRTVSPGPADLVGATLVDATRHGKFLD
LVFAGTGGERLDLVAHLSRAGWLRWKDSQPTTPGRGGRGGLAWRLVFDDGSGFDLTEAGT
QKRLAVYLVRDPAEVPGVARLGIDPLDPAFTVEALAALLTAAGRSQVKGVLTDQSVLAGV
GNAYSDEVLWAARLSPFAPSSGLSGDQVAALHEALVGTLRAAVEAAGGLGAADLKAEKKA
NLAVHARTGEACPRCGDTVRQVSFADRSLQYCPTCQTGGRLLADRRLSRLLK
NT seq 879 nt NT seq  +upstreamnt  +downstreamnt
atgccggagctgcccgagatggaggcgctcgcgagcgtgctgcgcgaccgcgcggtcggc
aaggtcgtcacgagggccgagccggtcgccatcaacgcactgcgcaccgtctcgcctggc
ccggccgacctggtcggcgcgaccctggtcgacgccacgcggcacggcaagttcctcgac
ctcgtcttcgccggcaccggcggcgagcggctcgacctcgtcgcgcacctgtccagggcc
ggctggctgcgctggaaggacagccagccgacgacgcccggccgcggcgggcgcggtggc
ctcgcctggcggctggtgttcgacgacgggtccggcttcgacctcaccgaggccggcacc
cagaagcggctggccgtctacctggtgcgcgacccggccgaggtgcccggtgtggcccgg
ctgggcatcgacccgctggaccccgccttcaccgtcgaggcgctggccgccttgctcacc
gccgccgggcgcagccaggtcaagggcgtactgaccgaccagtcggtcctcgccggggtc
ggcaacgcctactcggacgaggtgctgtgggcggccaggctgtccccgttcgccccgtcc
agcggcctgtccggcgatcaggtcgccgccctgcacgaagccctggtgggaacgctgcga
gcggccgtcgaggcggccggcgggctgggcgccgccgacctgaaggcggagaagaaggcc
aacctggccgtgcacgcgcggaccggcgaggcctgtccgcgctgcggcgacaccgtccgc
caggtctcgttcgcggaccgcagcctgcagtactgccctacctgccagaccggcggccgg
ctactcgccgaccgccgcctgtcccgcctgctgaagtag

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