KEGG   Pseudofrankia inefficax: FraEuI1c_4883
Entry
FraEuI1c_4883     CDS       T01354                                 
Name
(GenBank) excinuclease ABC, C subunit
  KO
K03703  excinuclease ABC subunit C
Organism
fri  Pseudofrankia inefficax
Pathway
fri03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:fri00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    FraEuI1c_4883
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fri03400]
    FraEuI1c_4883
DNA repair and recombination proteins [BR:fri03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     FraEuI1c_4883
SSDB
Motif
Pfam: UvrC_RNaseH_dom HHH_5 GIY-YIG HHH_2 UVR HHH HHH_3 Transposase_20
Other DBs
NCBI-ProteinID: ADP82873
UniProt: E3J1R5
Position
complement(5987400..5989907)
AA seq 835 aa
MADPASYRPAPGSIPETPGVYRFRDPHGRVLYVGKAKNLRARLNNYFTDVFALHPRTRTM
VTTASSVEWTVVSTEVEALALEYTWIKEYDPRFNVRYRDDKSYPSLAVTLQEEFPRLQVM
RGPKRKGVRYFGPYAHAWAIRETLDLLLRVFPARTCSTGVFKRAGQVGRPCLLGYIDRCS
APCVGRVTPDEHRQIVDDFCDFMAGQTGRFLRRLEDEMRAAADAQDYERAARLRDDAGAL
RRAMEKQAVVLADGTDADVVAFAQDELEAAVQVFYVRGGRVRGQRGWVVDKLADVTTADL
VEQFLTQEYLGDKDLGDIELGDLSPARPGPGATAAPAETAGAEDAAGVLRRGRPSRAGAA
PDAVRGVGGRHADIPREVLVPELPTDADAVGELLARYRGGRVEVRVPQRGDKRTLMETVE
RNAKQALVLHRTKRASDLTARSLALAELQETLGLAEAPLRIECFDVSHTQGQDVVASMVV
FEDGVARKSEYRRFTIRGAARRDGNEQDDTASMYETVSRRFSRYLAELSRTGELPGTDQD
APADGSAGAAAGAEGTDGPEPLVVDGRPRRFAYPPNLVVVDGGPPQVAAAARALADLGID
AGPGGVALCGLAKRLEEVWLPDDPDPVILPRTSEALYLLQRVRDEAHRFAITFHRQKRSA
SMTSSLLDGVPGLGETRRKALLKTFGSVAKLRAASAEEISTVPGIGPRTAAAIVAALATS
GPGTPGAPAPAVDPLTGEILETPSGAAPPTAPGGPAERRPTPAGRPKSAGKATSTGSRAS
VPDAGAPAPADAAAGSGPVDGASRVNGASRVNGASRVTEASRVNGEHAVTRGNTP
NT seq 2508 nt   +upstreamnt  +downstreamnt
atggctgatccggcgtcctaccggcccgcgccgggctcgattcccgagaccccgggcgtg
taccgattccgggacccccatggccgcgtgctctacgtcggcaaggccaagaacctgcgc
gcccgcctcaacaactacttcaccgacgtcttcgccctgcaccctcgtacccgcacgatg
gtcaccacggcgagctcggtcgagtggaccgtcgtgtccaccgaggtcgaggccctcgcg
ctggagtacacctggatcaaggagtacgacccgcgcttcaacgtgcgctaccgcgacgac
aagagctatccgagtctcgcggtgacgctgcaggaggagttcccccggctccaggtcatg
cgcgggccgaagcgcaagggcgtgcgttacttcgggccgtacgcgcacgcgtgggcgatt
cgcgagacgctggacctgctgctgcgggtcttccccgcgcgcacctgctccaccggcgtc
ttcaagcgcgccggccaggtcggccggccgtgcctgctgggctacatcgaccgctgcagc
gcgccctgcgtcgggcgggtgactccggacgagcaccgccagatcgtcgacgacttctgc
gacttcatggcgggccagaccggccggttcctgcgccggctggaagacgagatgcgcgcg
gccgccgacgcccaggactacgagcgggcggcccggctgcgcgacgacgccggcgcgctg
cgccgggcgatggagaagcaggccgtcgtgctggccgacggcaccgacgccgacgtcgtg
gccttcgcgcaggacgagctggaagcggccgtccaggtcttctacgtgcgcggcggccgg
gtccgcggccagcgcggctgggtcgtcgacaagctcgccgacgtcaccaccgccgacctg
gtcgagcagttcctcacccaggagtacctgggcgacaaggacctgggcgacatcgagctc
ggcgacctgagcccggcccggccgggtcccggggcgacggcggcgccggccgagacggcc
ggcgccgaggacgccgccggcgtgctccgccgcggccgcccctcccgggccggcgccgcg
ccggacgccgtgcgtggcgtgggcggccggcacgcggacatcccccgcgaggtgctcgtc
cccgagctgcccaccgacgccgacgccgtcggcgagctgctcgcccggtaccgcggcggt
cgggtcgaggtgcgggtcccgcagcggggcgacaagcgcaccctcatggagacggtcgag
cgcaacgccaagcaggcactcgtcctgcaccgcacgaagcgggccagtgacctgaccgcc
cgcagcctggcgctcgccgagctgcaggagacgctcggcctcgccgaggcgccgctgcgg
atcgagtgcttcgacgtctcgcacacccagggccaggacgtcgtcgccagcatggtggtc
ttcgaggacggcgtcgcccgcaagtccgagtaccgccggttcaccatccggggcgccgcg
cgccgggacgggaacgagcaggacgacacagcgagcatgtacgagacggtcagccgccgg
ttctcccggtacctggccgagctgtcccgcaccggggagctacccggcaccgaccaggac
gcgcccgcggacggcagtgccggcgcggcggcgggggccgaggggacggacggccccgag
ccgctggtcgtcgacggcaggccgcgccggttcgcctacccgccgaacctcgtcgtcgtc
gacggcggcccaccgcaggtcgccgcggcggccagggcactggccgacctggggatcgac
gcggggcccggtggcgtcgcgctgtgcggactggccaagcggctggaggaggtatggctc
ccggacgacccggacccggtgatcctgccgcggaccagcgaggcgctctacctgctgcag
cgggtccgcgacgaggcacaccggttcgcgatcaccttccaccgccagaagcggtcggcc
tcgatgacctcgtcgctgttggacggcgtccccggcctcggcgagacccggcgcaaggcg
ctgctgaagacgttcggctcggtggcgaagctgcgcgcggcgagcgcggaggagatctcg
accgtgccggggatcggcccgcggaccgccgcggcgatcgtggccgcgttggcgacgagc
gggcctggcacccccggcgccccggcacccgccgtcgacccactgaccggcgagatcctc
gagacgccgtccggagcggcgccgcccacggcaccgggaggtcccgccgagcggcgcccg
actccggccgggcggccgaaatcggccggaaaggcaacgtccacggggagcagagcgtcg
gttccggatgcgggagcgccggcgcccgccgacgcggccgccggttccggcccggtggac
ggggcctccagagtcaacggggcctccagagtcaacggggcctccagagtcactgaggct
tccagagtcaatggagaacacgcggtgacaagggggaacacgccatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (16)   

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