KEGG   Francisella sp. MA067296: BBG19_0244
Entry
BBG19_0244        CDS       T05204                                 
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
frm  Francisella sp. MA067296
Pathway
frm03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:frm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BBG19_0244
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:frm03021]
    BBG19_0244
   03400 DNA repair and recombination proteins [BR:frm03400]
    BBG19_0244
Enzymes [BR:frm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BBG19_0244
Transcription machinery [BR:frm03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BBG19_0244
DNA repair and recombination proteins [BR:frm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BBG19_0244
SSDB
Motif
Pfam: RNA_pol_A_CTD RNA_pol_A_bac RNA_pol_L POLH-Rev1_HhH DUF4094 RAD51D_N Pectinesterase
Other DBs
NCBI-ProteinID: APC90982
Position
239202..240173
AA seq 323 aa
MSNNNSKQEFVPNIQLKEELEAFSYKVQLSPVEKGMAHILGNSIRRVLLSSLSGASIIKV
NIANVLHEYSTLEDVKEDVVEIVSNLKKVAIKLDKGIDRLDLELSVNKSGIVTAGDFKTT
QGVEIINKDQPIATLTSTRAFSLTATVSLGRNVGILSAMPTELERVGDIAVDADFNPIKR
VAFEVFDNGDSETLAVFVKTNGTIEPLAAVTKALEYFCEQISVFVSLRVPSNGKIGDVLT
NSNIDPILLKPIDDLELTVRSSNCLRAENIKYLGDLVQYTETQLMKIPNLGKKSLHEIKQ
ILIDNNLSLGVQIDNFRELVEGK
NT seq 972 nt   +upstreamnt  +downstreamnt
gtgagtaataataattcaaagcaggaatttgtacctaatatacaacttaaagaagagtta
gaagcttttagctataaagttcaactctctcctgtagaaaaaggtatggctcatatcctt
ggtaactctattagaagggttttattatcttcgctatcaggtgcatctataattaaagta
aacatcgctaatgtattacatgagtactctactttagaagatgtcaaagaagacgttgtt
gaaattgtttctaatttgaaaaaggttgcgataaagcttgacaaaggtatagatagactt
gatctagaactatctgtaaataagtcaggtattgttaccgctggagactttaagacaact
cagggtgtagaaataataaataaagatcagccaatagctactttgacaagcacaagagca
tttagcttaactgctactgtaagcttaggtagaaatgtaggaatattatctgcaatgcca
acagagcttgagagagttggtgacatagctgtagatgctgattttaatcctattaagaga
gttgcttttgaggtttttgataatggtgatagtgaaactctagcagtatttgtaaagaca
aatggtactatagaaccactagcggctgttacaaaagctttagagtatttctgtgagcaa
atatcagtatttgtatctcttagagtacctagtaatggtaaaataggggatgtattaacc
aattctaatattgatcctattcttcttaagccaattgatgatttagagttgactgtgaga
tcatctaactgcctacgtgcagagaatatcaagtatcttggtgatttagtacagtataca
gaaacacagcttatgaagatacctaacttaggtaagaagtctctccatgagatcaaacaa
attttaatagataataacttatctctaggcgtccaaattgacaattttagggaactagtt
gaaggaaaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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