KEGG   Francisella sp. MA067296: BBG19_0435
Entry
BBG19_0435        CDS       T05204                                 
Name
(GenBank) Exodeoxyribonuclease V beta chain
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
frm  Francisella sp. MA067296
Pathway
frm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:frm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BBG19_0435
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:frm03400]
    BBG19_0435
Enzymes [BR:frm01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     BBG19_0435
DNA repair and recombination proteins [BR:frm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BBG19_0435
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 DUF6567 SAT
Other DBs
NCBI-ProteinID: APC91171
Position
443458..447147
AA seq 1229 aa
MKNLDAKTIPLQGRHIIEASAGTGKTYNITELYIRLLLEKKLLPSQILVMTFTKDATQEI
IGRVEAKIRAVIDDVAKAKEVKVWINKQETLIKKGDDNYKHLKRALLEIDEAAIFTIHGF
CKKVLSEQAFASGIEMDVTMEVDTSDILHKVVEDFFRKNINKNQTKFEYLKAYNLHTPGK
FLDRDGLLNVIRSNCEILADSFEQEVNKLIKEKKQVFGNLVKNKAFIFDALVTAKDKKQP
SIKKEQVRTQEWEFIESWANDNKFSLMPKEISAFIHGNRYRGRSDIAEIFEEIKALKDKY
SDIKNLEEYKKQFEAAQFIQQACLQIRQEFAKAKEQKSILDFNDLITKLCQSVKNSSDLV
KTLQAQYPVALIDEFQDTDAEQYQILDTIYPKDKNDLLFLMIGDPKQAIYGFRGGDIFTY
LKAKDSCPVVNQWSMDTNWRSTNEMIKAYNRLFYTQDYQEDGVIGKDIFIAGIDYQTVKA
SPNTNSKNKDFDDNLKPINYFYYQVAVDDNKSDIDKKLSVWTTNEIDRLLNSKKVAENDI
AILVENSTQAKIIQQALRQKNLSSVYLSQRDNVYHSQEAQEILAVMEGINDLENKYLLKR
ALSTSLLGGTADKMLKYHAEDDLSVWDEEIEKAKKLRSKWHKYGFMAFIMQIVHESFSQR
NESKERTITNILHLAVLIKVAENKYKHSNQLIKWYRQQLKNTASSEAELRLESDDNLIKI
ITIHGSKGLEYSVVFIPFASYVSSSKLKLYKINKYYNNQLKQTVYKIGGNDGELKKTVEK
ETIEELMRLFYVAVTRAEHRCYIGVAKYNNGEKSPLAQFLGYQEGEDWLERIQKITDNID
NQSLLINVEDNQNINFKRTPSTSTSFSNHGVEVSNNEALKPNHIGNLKNDNWEMLSFSKI
SQAKAQNPALEKENDESEDDKNQDLDKKLEFRFTASKGADIGNILHNVLEHTDFSNGQID
DTLLQEQIARYKVVAAEDFSNLKVWLEECLVAPILPISVIPSGLTTESFKYSSNCQNSEI
LKRVQDDNIIYNNKLSNSFSLKDIPNSKTLKEAEFYFPVTNEKLYKMHIIKILEEYRKTT
QVISDSDRESFNLFEKNTRLREYDDAILNHKIFGMLHGFIDLIFEYNDKFYIADYKSNYL
GNKLEDYNQQAMQEKNQSSLYDLQYLIYSVALDKYLKQNIPNYDFEKHFGGVYYFYLRGM
KDGFGVYQARPPLEIINMLAKLFNGGDNV
NT seq 3690 nt   +upstreamnt  +downstreamnt
atgaaaaacctagatgcaaaaacaatacctttacaaggtcgccatatcattgaggcaagt
gctggtacgggtaagacttataatatcaccgagctatatatccgattgttgctagagaag
aaattattacctagccaaattcttgtgatgacatttactaaggatgctacacaagagatt
atcggtagagttgaagctaagattagagcagttattgatgatgtagctaaagcaaaagag
gtcaaagtttggataaataaacaagaaactttaattaaaaaaggcgatgacaactacaag
catctaaaaagagcattacttgagatagatgaggcagctattttcacaattcatggtttt
tgtaaaaaggttttaagtgagcaggcttttgctagtggtatcgagatggatgtcactatg
gaggttgatacttctgatattttgcacaaggttgtcgaagatttctttagaaaaaacatt
aataaaaaccagactaaatttgagtatctaaaagcctataatttacatacaccaggcaaa
tttttagatagagatggtttgcttaatgttattagatctaattgtgagattttagcagat
agctttgagcaggaagttaacaaattaataaaagagaaaaaacaagtttttggtaatttg
gtaaaaaacaaagcttttatatttgatgctttagtaacagcaaaagataaaaagcaacca
tctattaaaaaagagcaagttagaactcaagagtgggaatttattgaaagttgggctaat
gataataaatttagtttgatgcctaaagagatttctgcatttatacatggtaatcgttat
cgtggaagaagtgatattgccgaaatctttgaggaaattaaagctttaaaagataaatat
tcagatataaaaaatttagaagaatataaaaaacagtttgaagcagcacaatttatccaa
caagcctgcttacaaatccgtcaagaatttgctaaagccaaagagcaaaagagtatttta
gattttaatgacttaattactaaactttgtcaaagtgttaaaaattcgtctgatttagtc
aaaactctacaagcacaatatccagttgctcttatagatgagtttcaagatactgatgct
gaacaatatcaaatattagatactatctatcccaaagataaaaatgatttattatttctt
atgataggtgatccaaagcaggcaatttatggatttagaggtggcgatattttcacatat
ttaaaagctaaagatagttgcccagtagttaaccaatggagtatggatactaattggcgc
tctaccaacgaaatgataaaggcttataatcgccttttctatactcaagattaccaagaa
gacggagttatcggtaaagatatttttattgcaggtattgactatcaaactgtcaaagca
tctccaaatactaatagtaaaaataaagattttgatgataatcttaagcctattaactac
ttttattatcaagtagcagttgatgataataaaagtgatattgataaaaaattatcagta
tggacaacaaatgaaattgataggttactaaactctaaaaaagtagctgaaaatgatatt
gcaatacttgtagagaatagtacccaagcaaaaattattcaacaagctttacgccagaaa
aatcttagttcagtctatctaagccaaagagataatgtctaccatagtcaagaggcacaa
gagatattagctgtaatggagggtatcaatgatcttgaaaataaatatttactcaaaaga
gcattatctactagtctgctaggcggtactgctgacaaaatgcttaaatatcacgccgaa
gatgatctatcagtatgggatgaggagatagagaaggctaaaaaattacgcagcaaatgg
cataagtatggttttatggcgtttataatgcaaatagttcatgagagttttagccaaaga
aatgaaagcaaagaaagaactataactaatatcctgcatcttgctgtgcttataaaagtt
gctgaaaataaatataaacattcaaatcagctaattaaatggtatcgtcaacaactcaaa
aatactgctagtagtgaagctgaattaagattagaaagtgatgataatttgataaaaata
atcacaattcacggctcgaaaggtcttgaatattctgttgtatttataccgtttgcaagt
tatgtaagttcttcaaagcttaaattatataaaattaataaatattataataatcaacta
aaacaaactgtttacaaaattggcggtaatgatggtgagttaaaaaaaacagttgaaaaa
gaaactattgaagagctaatgagattattttatgtcgcagttacgcgcgcagaacatcgc
tgctatattggagtagcaaaatataataatggtgaaaagtcaccattagcacaattttta
ggttatcaagagggtgaagactggctagaaagaattcaaaaaatcacagataatatagat
aatcaaagtttgcttataaatgttgaagataatcaaaatattaattttaaaaggacgccg
agtacttcgacttcattcagcaaccacggagtcgaagtgtcaaataatgaagctttaaaa
ccaaatcatataggtaacttaaaaaatgataactgggaaatgttatctttctctaaaata
tcgcaagcaaaagctcaaaacccagctttagagaaagaaaatgatgagtcagaggatgat
aaaaatcaagatctagacaaaaaattagaatttagatttacagcttctaaaggagctgac
attggtaatattctccataatgttttagagcatacggattttagtaatggccaaattgat
gatactcttttacaagagcaaatcgctagatataaggttgttgctgcagaagattttagt
aatttaaaagtatggttagaagaatgtttagtagctccaattttacctataagcgtcatt
ccgtcaggcttgaccacggaatcttttaaatatagcagcaattgtcaaaatagtgagatc
ctgaaacgagttcaggatgacaatattatttataataataaattgagtaatagttttagc
ctaaaagatattccaaattcaaaaaccttaaaagaagcagaattttacttccccgtgaca
aatgaaaaactttataaaatgcatatcattaaaattctagaggaatatcgcaaaaccact
caagtcatttccgactctgatcgggaatcttttaacttatttgaaaaaaatacccgccta
cgcgagtatgacgatgctatactaaatcataaaatctttggtatgttacatggttttata
gacttaatttttgagtataatgataagttttatatcgcagattataagtcaaactatctt
ggtaataaattagaagactataatcaacaagctatgcaagagaaaaatcaaagtagtttg
tatgatttgcaatacttgatatatagtgttgccctagataaatatcttaagcagaatata
ccaaactatgactttgagaaacattttggcggagtatattatttttatcttcgtggtatg
aaagacggctttggagtctatcaagcaaggccacctttagaaattataaatatgttagct
aaattgtttaatggaggtgataatgtataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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