KEGG   Francisella sp. MA067296: BBG19_1569
Entry
BBG19_1569        CDS       T05204                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
frm  Francisella sp. MA067296
Pathway
frm03030  DNA replication
frm03410  Base excision repair
frm03420  Nucleotide excision repair
frm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:frm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BBG19_1569
   03410 Base excision repair
    BBG19_1569
   03420 Nucleotide excision repair
    BBG19_1569
   03440 Homologous recombination
    BBG19_1569
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:frm03032]
    BBG19_1569
   03400 DNA repair and recombination proteins [BR:frm03400]
    BBG19_1569
Enzymes [BR:frm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BBG19_1569
DNA replication proteins [BR:frm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     BBG19_1569
DNA repair and recombination proteins [BR:frm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     BBG19_1569
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BBG19_1569
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: APC92295
Position
complement(1613221..1615914)
AA seq 897 aa
MKKIVLVDGSSYLFRAYHALPHLTNSQGEPTGAIIGVINMLKKLPIMYDTEYVAVVFDAK
GKNFRHQLYPQYKAHRKDMDDELRAQIQPLHQIIEKMGFPVIVEDGVEADDVIGTLAQNL
QKQGYQIIISTGDKDMAQLVTDNIVLYDSMKNITTDVAGVLEKYQISPHQMIDYLALMGD
STDNIPGIPKVGPKTAVKWLQEYQNIEGIIANQAQIKGKVGENLRNNIDLLKLSYQLATI
KCDLEFDLAVEDLKCKAADKAYLIKAYTRYEFKSLLKDLDDGAIKLVSSQAQAADITIEY
ITVTTQHQLEHLIAELNKSDGFAFDTETDSLNTYEANLIGLSFCAKEGQAFYIPLQHRYL
GVPQQLELGFVVDRLKPLFADPEKAKVAHNFKFDEKVLSKYAVEIDGQVNDTMIMAYVLK
SSGKHDMDSLSKEHLGIEPIAYTAIAGTGKQQQTLDQIDIEVVAKYAAEDADITFRLFNY
FRTLLKQDEVLYKLYSEIEMPLTIILNQMEKLGVKIDATKLIQQSASLAISIKELESKCY
NLAGQEFNLSSPLQLREILFGKLGLPPVKKTAKGQVSTSEEVLVQLAEDYEIAALLMKYR
HLSKLKNTYTDKLPKMLDANGRVHTSYNQTGTVTGRLSSSDPNLQNIPIKSPEGRKIREA
FIAEDDYCIVAADYSQIELRIMAHLSKDNNLLKAFNQGLDIHSATAAEVLGISIDEVSSE
QRRRAKAINFGLIYGMSAFGLAKQLEIPRAEAQEYIDIYFNRYPSVKEYMFSAKEFAKQK
GYVETILGRRLYLPEINSKNVMQRNAAERAAINAPMQGTAADIIKKAMIEVNTMISQEYN
NEVKMVMQVHDELVFEVKRTKLEKVAAKIKVIMEAAVKLSVPLEVNVDAGENWDQAH
NT seq 2694 nt   +upstreamnt  +downstreamnt
atgaaaaaaattgttttagtcgatggctcttcatacctttttagagcctatcatgcctta
ccacatcttactaatagccaaggtgagcctacaggagcaattattggtgttatcaatatg
ctcaaaaaattgccaataatgtatgatacggaatatgttgcagttgtatttgatgcaaaa
ggtaagaattttcgtcatcaattatatccacaatataaagcacaccgtaaagatatggat
gatgagctaagagctcaaattcaaccgttgcatcagattattgagaaaatgggtttccct
gttattgtcgaagatggtgtcgaggctgatgatgtaataggcactctagcgcaaaacctt
caaaaacaaggttatcaaattatcatctctactggtgataaagatatggctcagttagtt
acagataatatagttttatatgattcaatgaaaaatatcaccacagatgttgcaggagta
ttagaaaaatatcaaattagcccacaccagatgatagattatctagcattaatgggagat
tcaacagacaatattccaggtattccaaaagttggacctaagactgctgttaaatggttg
caagaataccaaaatattgagggcataattgcaaatcaggcgcaaattaaagggaaagtt
ggcgagaacttacgtaataatattgatttgctgaaactatcttaccagttagcaacaatt
aaatgtgatcttgagtttgatttagctgtagaagatttaaaatgtaaagcagctgataaa
gcatatcttattaaagcttatacaagatatgagtttaaatctttattaaaagacttagat
gacggcgctattaagttagtatctagtcaagcgcaagccgctgatattactattgaatat
attactgttaccacacaacaccagctagagcatctaatcgcagaactaaataaatctgat
ggctttgcttttgatactgaaactgattctttaaatacctatgaagcaaacctaataggt
ttatctttttgcgctaaagaggggcaagctttttatatcccgttacaacatagatattta
ggagtaccacagcagctagaactaggttttgttgtggatagactaaagccactatttgca
gatcctgagaaagcaaaagtggcacataactttaaatttgatgaaaaagtgctatcaaaa
tatgcagttgagatagacggtcaagtcaatgatacgatgattatggcgtatgtgctaaaa
agtagtggtaagcatgatatggatagtctttctaaagaacatcttggtatagagccaatt
gcgtatactgcaatagccggtactggtaaacaacaacaaactttggatcagatagatatc
gaggttgttgctaaatatgctgctgaagatgctgatatcacatttaggctttttaactat
tttagaactttattaaagcaagatgaagttctttataaactttattctgagattgagatg
cctttgactattattcttaatcagatggaaaagttaggtgtaaagatagatgctactaag
cttatacagcagagtgctagtcttgcaatatctatcaaagagcttgaaagcaaatgttat
aatcttgctgggcaagagtttaatttatcttcgccattacaattaagagaaattcttttc
gggaagctgggacttcctccagttaaaaaaacagcaaagggacaagtatcaacttctgag
gaggtgttagttcaactagctgaagattatgaaatcgcagctttgttaatgaaatatcga
catttatcaaaacttaaaaatacatatacagataagctacctaagatgttagatgcaaac
ggtcgtgtgcatacttcatataaccaaacaggtacggtaacaggtagattatcttcttct
gatcctaatttacaaaatatacctataaaaagtcctgaagggcgtaaaattagagaggct
tttatagccgaagatgattattgtatagtcgctgcagattattcgcaaattgagcttaga
atcatggcacatctatcaaaagataacaatcttctcaaagcttttaatcaaggtttagat
atccatagtgcaacagctgctgaggttttaggtattagtatagatgaggttagcagtgaa
caaagaagaagagctaaagcaataaactttggtcttatctatgggatgagtgcttttgga
ttagctaaacagttggaaatacctcgagcagaagcacaagaatatattgatatatatttt
aatcgttatccaagtgttaaagagtatatgttttcagcaaaagagtttgctaagcaaaaa
ggctatgttgaaactatactaggtagaagattgtatctgccagaaattaactcaaaaaat
gtaatgcagcgtaacgctgcagagcgagcagcaattaatgcaccgatgcagggcacagct
gcggatattatcaaaaaagctatgatagaagttaatacgatgatttcccaggaatataat
aacgaggttaagatggtgatgcaggtacatgatgagcttgtttttgaagttaaaagaact
aagcttgaaaaggttgctgcaaagataaaagttataatggaggcggctgtaaagcttagt
gtgcctttagaagtaaatgttgatgctggtgaaaactgggatcaagctcattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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