KEGG   Faecalibaculum rodentium: AALO17_04710
Entry
AALO17_04710      CDS       T04268                                 
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
fro  Faecalibaculum rodentium
Pathway
fro03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:fro00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    AALO17_04710
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fro03021]
    AALO17_04710
   03400 DNA repair and recombination proteins [BR:fro03400]
    AALO17_04710
Enzymes [BR:fro01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     AALO17_04710
Transcription machinery [BR:fro03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     AALO17_04710
DNA repair and recombination proteins [BR:fro03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      AALO17_04710
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L HHH_5 RAD51D_N DUF6235
Other DBs
NCBI-ProteinID: AMK53605
UniProt: A0A140DSH8
Position
422966..423919
AA seq 317 aa
MNTFKIDTLETSQTSGSFRMSPLPDHFGITLGNALRRVLLSAVPGGAVFSIRIDGVFHEF
TGIKGVTEDVAQIILQIKQLILKIDINDNDIYKLRINAVGPCTVTAGDIECPEGVEVLNK
DLPICTLAQGGSINIEMQARLGRGYVGAETNKHIYQNDGQPLGIIYTDALYSPVKRVAYK
SEPELDEAGAAYDTLTMEIDTDGTLSPEEALSIASKILRDHLAILQNLDEAVVDNPAAVE
TVTEETSSGLQHKLIEDLELSVRSYNCLKRAGITTVEELIDKTEDELMHVRNLGKKSLKE
VKEKIYSLGLSFKAGNE
NT seq 954 nt   +upstreamnt  +downstreamnt
atgaatacgtttaagatcgacaccctggagaccagccagacttccggatcgtttcgaatg
agcccgctgccggatcatttcggcatcactctgggcaacgccctgcggcgtgtactgtta
tccgcagtgccgggaggtgctgtgttctcgattcggatcgacggcgtattccatgaattc
accggcatcaaaggcgtgacggaagatgttgcacagatcattctgcagatcaaacagctg
atcctgaagattgacatcaatgacaatgacatctacaaactgcgcatcaatgcggtgggt
ccgtgcacggtcacggccggtgacatcgaatgtcccgaaggtgtggaggtcctcaacaag
gatctgcccatctgcaccctggcacagggggggtccatcaacattgagatgcaggcccgg
ctgggacgcggctatgtaggtgccgaaaccaacaagcacatctaccagaatgacggacag
cctcttggaattatttatacagacgctttgtattcaccggtgaaacgcgtcgcctacaaa
agcgagccggaactggatgaagcaggcgctgcgtatgacacactgacgatggaaatcgac
acagacggaacactgagcccggaagaagcgctttccatcgcctcgaaaatcctcagggat
cacctggcgattcttcagaacctggatgaagcagttgtggacaaccccgcagcagtggaa
accgtcactgaagaaacatcatccggactgcagcacaagctcatcgaagacctggaactg
tcggttcgttcctataactgcctcaagcgggcaggcattaccacggtggaggaactgatc
gacaagaccgaagacgaactgatgcatgtacggaatctgggtaaaaaatccctgaaggaa
gtcaaagaaaaaatctactcccttggactcagcttcaaggcgggcaacgaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (31)   

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