KEGG   Francisella salina: F7308_1845
Entry
F7308_1845        CDS       T01560                                 
Name
(GenBank) DNA polymerase III alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
frt  Francisella salina
Pathway
frt03030  DNA replication
frt03430  Mismatch repair
frt03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:frt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    F7308_1845
   03430 Mismatch repair
    F7308_1845
   03440 Homologous recombination
    F7308_1845
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:frt03032]
    F7308_1845
   03400 DNA repair and recombination proteins [BR:frt03400]
    F7308_1845
Enzymes [BR:frt01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     F7308_1845
DNA replication proteins [BR:frt03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     F7308_1845
DNA repair and recombination proteins [BR:frt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     F7308_1845
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon SpoVAE
Other DBs
NCBI-ProteinID: AEI36769
UniProt: F8GAG6
Position
complement(1893095..1896574)
AA seq 1159 aa
MFSHLRIHTGFSVVDSTVRLSDLFARAKDKNIPAVALTDVCNLFAAVKFYKQALSNGIKP
IFGVELKIDTEFGVCDLVLLAENNQGYQNIVDLVSKAYQEAERFGSIPLIPKSCLKDTKL
DNVICLNGGQYGEFGQAVLAKDIEKAEQVIAENIAIFGVDNYIVEIHKLGYENEGLYNEK
ALELVSKHNLIAVATNLTVFMESDDYDIHEIRACINEKTTILDESRKSKFTREQYLKSAD
EIYQIFSELPVLLENTLAIAKRCNVTFDLGKPCLPTVDIPDGLTEREYFSKLCYQGLDKR
LAKILENRPADKHEHIIKVYKDRLQREIDIICDMGFPGYFLIVEDFIRWSKENDIPVGPG
RGSGAGSLVAYSLLITDIDPLPYGLLFERFLNPERVSMPDFDIDFCIQGRDRVIKYVEQK
YGKQSVGQIITYGTMAAKGVVRDVVRVMGQSFGFGDRIAKLIPETPGTTFKKILHEGEPL
YDEMQADEEVAEIVEKAQKLEGLPRSLGKHAAGIVISPTVISDFAPVYCEDKGGDIVTQF
DKGDVEDVGLVKFDFLGLKNLTIIKNAIASINAKRPANETPLDISDIPLDDEKTFKLLQA
GKTIGIFQLESQGMQQIVKDLGTSNFEEIIALVALYRPGPMENIPTFVDRKHGRKQTIYL
HPLLEEVLRETYGIPVYQEQVMQMAQKLAGYTLGGADLLRRAMGKKKPEEMEQQRKIFKE
GAAKYHNIEAGLADEIFDQMEAFAGYGFNKSHAAAYALIAYQTAWLKAHYPDEYMAALMS
GDMGNTDQLVKFILDAKNMGITVLAPNVNKSVHDCIAASKGTILLGLGAIKGLGGEAIKS
ILNEREVGGEFSSIFDLTRRVDLRKVNKKALEALCFAGAIKDISKNRATAFNSIEKAIKN
AGYVNEMAAAGQNDLFGFTEQESDTDTELERECIVEEWNLRELLINEKKALGMYFSGHII
DGESHWRNHVSFSDLEKIQKPNMDGNSVRIIASMITPPARRKTKTGRVLYIINIDDEFER
ADCLVGEDVFAAVKDNIQVDDVVVVEGKVSYDKQRECNKLSVDKVQPISQYIDENFSKVE
LNLRSQNVNPTNLKKVLDNLKKNIATIDIQRENVLEIKVSLDDVDAKFEYFRKPFSVYEF
VNDISRLIAEGTTVSLSGL
NT seq 3480 nt   +upstreamnt  +downstreamnt
atgttttctcaccttcgtatccatactggattttctgttgtcgatagtactgttcgtttg
agtgatctctttgccagagcaaaagataagaatatccctgcagtagcactgacggacgta
tgtaatttatttgctgcagttaaattttataagcaagctttgtcaaatgggattaagcct
atctttggtgtagagctaaagattgatactgagtttggtgtttgtgatctggttttattg
gcagagaataatcaaggctatcaaaatattgttgatttagtttcaaaagcatatcaagaa
gctgagaggtttggctcaattccactaattcccaaaagttgtttgaaagatactaaatta
gataatgttatttgtttaaatggtggtcaatatggcgaatttggacaagctgtattggct
aaagatattgaaaaagcagagcaagtaatagctgaaaatatcgcaatatttggtgttgat
aactatatcgtagagattcataagcttggatatgaaaatgagggcttgtataacgagaaa
gcacttgaacttgtaagtaagcataatcttatagctgtagctacaaatttaactgttttt
atggaatcagatgattatgatatccatgaaattagggcttgtatcaatgaaaaaacaaca
attcttgatgagtcgcgtaaatctaaatttacaagagaacagtatctaaagtcagctgat
gagatatatcaaattttttcagagctaccagtattgttagagaatactttagcaatcgca
aaaagatgtaatgtaacatttgatttaggtaaaccatgtttgccaacggtagatattcca
gatggtttgacagaaagagagtacttttcaaagctatgctatcaaggtttagataaacgt
ttagcaaaaattttagaaaatagaccagctgataagcatgagcatattataaaagtttac
aaagatagactacaacgcgagatcgatattatctgcgatatgggctttcctggctatttc
ttgatagttgaagatttcattagatggtcaaaagagaatgatataccagtaggtccaggg
cgtggttctggtgctggctcattagtagcttattcattgcttattaccgatattgatcct
ttaccgtatggtttactttttgagagatttctaaatcctgaaagggtatctatgcctgat
tttgatattgatttctgtatccaaggtagagatagagttatcaaatatgtagagcaaaaa
tatggtaagcaaagtgttgggcaaattatcacctatggcactatggctgctaaaggtgtg
gtgcgagatgtagtgcgtgtgatggggcagagttttggttttggagataggattgctaag
ctaataccagaaacgccagggacaacatttaagaagattctccatgagggagagcccctg
tacgatgaaatgcaagcagatgaagaagtagcagagattgttgaaaaagctcaaaaatta
gaaggtctaccacgaagcttgggtaagcatgccgcgggtattgtgatatcgccaactgtg
atatcagattttgctcctgtatattgtgaagataaaggtggagatatagttacccaattt
gataagggcgatgtggaagatgttggacttgttaagtttgacttcttggggctaaagaac
ttaacaattatcaaaaatgctattgcaagcatcaatgctaaaagaccagctaatgaaacg
cctctagatatttctgatattcctcttgatgatgagaaaacatttaaactgcttcaagct
ggtaaaactatcggtatatttcagctagagtcacaaggtatgcaacagattgtcaaagat
cttggcacatcaaactttgaggagattatcgccttagtagcactatatcgtcctggtccg
atggagaatatcccaacattcgtagatcgcaaacatggcagaaagcaaactatctactta
catccattattagaagaagttcttagagagacttatggtatcccagtttatcaagagcag
gtaatgcaaatggcgcagaagctagctggttacactcttggtggagcagatttattgcgt
cgtgcgatgggtaagaaaaagccagaagagatggagcaacagcgtaaaatcttcaaagag
ggtgccgctaaatatcataatatcgaagctggacttgctgatgaaatatttgaccaaatg
gaagcctttgctggctatggtttcaacaaatctcatgctgcggcttacgcgttgattgct
tatcaaactgcttggttaaaagctcattatcctgatgaatatatggctgctcttatgtca
ggagatatgggtaatacagatcagttggttaaatttattttagatgctaagaatatgggt
atcacagtcttagccccaaatgtaaataagagtgtacatgactgtattgcagcttcaaaa
ggaacaattttattgggtctaggtgctatcaaaggtcttggtggtgaagcaattaaaagt
atacttaatgagcgtgaggtaggtggtgagtttagttctatttttgacttaactcgtaga
gtggacttgcgtaaggttaataaaaaagcactcgaagccttatgttttgcaggagctatc
aaggatatatctaaaaatagagcaacagcttttaattctatcgaaaaagctatcaaaaac
gctggttatgtgaatgaaatggctgctgcagggcaaaatgatttatttggtttcacagaa
caagagagtgatactgatacagagcttgaaagagaatgtattgtagaagagtggaatctt
agagagcttttgattaatgagaaaaaagcattagggatgtatttctcagggcatattatt
gatggtgaaagtcattggcgtaatcatgttagctttagtgatcttgagaaaatccaaaaa
ccaaatatggatggtaattctgtaagaattattgcaagtatgataacaccaccagctaga
cgaaaaactaaaactggtagagttctgtatattattaatattgatgatgagttcgaaaga
gcagattgtctagttggtgaagatgtatttgctgcagttaaggataatatccaagttgat
gatgtggttgtagtagagggtaaagttagctatgataaacaacgagagtgcaataaacta
agtgttgataaggtacaaccgatatcacaatatattgatgagaattttagtaaagttgag
ctgaatcttagaagtcaaaatgtaaaccctacaaacctaaaaaaagtattagataacctc
aagaaaaatatagccactattgatattcaaagagaaaatgtcttagaaataaaagtatct
ctagatgatgttgatgctaagtttgaatattttcgaaagcccttctcggtgtatgagttt
gttaatgatattagtaggttaatagctgagggtactactgttagtttgagtgggctttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

Download RDF
DBGET integrated database retrieval system