KEGG T01539: Flexsi

Flexistipes sinusarabici: Flexsi_0431

Entry

Flexsi_0431 CDS T01539

Definition

DNA polymerase LigD, polymerase domain-containing protein

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

fsi Flexistipes sinusarabici

Pathway

fsi03410	Base excision repair
fsi03420	Nucleotide excision repair
fsi03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:fsi03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:fsi03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:fsi03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining

SSDB

Motif

Pfam:

DNA_primase_S

Other DBs

NCBI-GI:

336322720

NCBI-GeneID:

10814718

UniProt:

F8E8Z5

Position

452503..453378

AA seq 291 aa
MKQKINGRTIEISNPHKVFYPNANITKGEILNYYNRIAEYMLPHIRNRLVVMQRFPEGIG
KEGFYHKQVPDYFPEWLQRKTVTLRKGEKQDIAVVNKKADIIYMAEKGVITFHIWLSQKD
NIEKPDKLIFDLDPPKKGEFSEVKFAAYKLRDLFQDMGLIPYVMTTGSKGVHVVTPIKPE
YDFDIIRQYVRDILTELVKKYPDRFTLEPRKDERQGRVFLDYLRHAFGQTSVAPYSLRPI
EGAPIATLLEWEELPYIENSQKYHMKNIFKRLSQKKDPWKEFKLHRKSLDI

NT seq 876 nt +upstreamnt +downstreamnt
atgaagcaaaagataaacgggcgaacgatcgaaatttccaacccgcataaagtgttttat
ccaaatgcaaacattaccaaaggggaaattttaaattattacaatcggattgctgaatac
atgctcccgcatatcaggaaccggcttgtggtaatgcaacggtttcccgaagggattggc
aaagaaggtttttatcataaacaggtaccggattatttccccgagtggttgcagcgaaaa
acggttacactgcggaaaggggaaaaacaggacattgctgttgtcaataaaaaggctgat
attatttatatggccgagaagggggtgattacgtttcatatttggctgtcacaaaaggac
aatattgaaaagcctgataaactgatttttgacctggatcctcctaaaaagggtgaattc
agtgaagtgaagtttgctgcttataaattgcgagatttattccaggacatgggtcttatc
ccttatgttatgacgaccggatcaaagggggtgcatgtagttactccgataaaacctgaa
tatgacttcgatattatccgacagtatgttagagatatactcacagagttggtaaaaaaa
tatccggatcgatttacacttgagccccgaaaagatgaaagacaagggcgcgtgtttttg
gattatctgcgtcatgctttcgggcaaacgtccgtggctccatattctcttcgtcctatt
gaaggtgctccgatagccacactgcttgaatgggaggaattgccgtacattgagaattca
cagaagtaccatatgaaaaatattttcaagcgactttcgcaaaagaaagacccctggaaa
gagttcaaacttcatagaaaatcattggatatttga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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