KEGG T01099: Fisuc

Fibrobacter succinogenes: Fisuc_2170

Entry

Fisuc_2170 CDS T01099

Definition

helicase, RecD/TraA family (EC:3.1.11.5)

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

fsu Fibrobacter succinogenes

Pathway

fsu03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:fsu03440]

SSDB

Motif

Pfam:

AAA_30 HHH_4 UvrD_C_2 AAA_19 Viral_helicase1 AAA_11 Helicase_RecD DUF2075 PIF1 AAA_22 AAA_23 T2SE HHH_5 AAA_14 UvrD_C AAA_18 AAA_28 PhoH AAA_29 UvrD-helicase DUF258 AAA NTPase_1 AAA_25 NACHT AAA_21 DUF4291 AAA_12 ATP-synt_ab AAA_17

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(2680503..2682578)

AA seq 691 aa
MRLNDIESKKVVVITGTFPALQPGETISVEGDWGSHPKYGKQFQATSFEYLATEDNDILE
YLASGQFPGVGQKIAERIVEAFGDATADILDNNPDKFREVKIKGFPARKVEAFLARWQEA
RHSRETMLFLYKHEIVGSVAKRLWNKFGQATIERITQNPYMLCEEVWGIGFLKADEIAQK
VGFPKDSPERFQAALLYTLQEASVSDGHVFLPKNVLLERTFRNLRLMQDDEGAINTLLDE
FEKASECGRITREGDDCYFPPLYNAEQRIADNIKLRLRYNELSTEGFEDALAQWEREHKF
SFDPIQKRAIQMALSRKISIITGGPGTGKTTILKGILYLARQMEECVSLTAPTGRAAKRM
GECCGEKARTIHRLLEVDPISGKFHRDGDNKLQCNLLIVDEFSMVDTWLAASLLEATPLN
ARIVLVGDADQLPSVGAGNVLNDLLRCPKIPSTRLQHIFRQAGGNDIADKASKINQGISP
SPIEGTNFHFLPYESADEAKDIIARLVTRGIKEKIDINTQEMQLLTPMRKGPLGIYELNN
FLQDLLNPGKERIKIASGNWSTGDRVMQIRNNYDKNVFNGDVGIIYKIGKDTKKITVFYD
DKTVDYEPDEADELILAYACTIHKSQGSEYPAVIVVLDSSHSIMLQRNLIYTAITRAKGH
VWILSAPGAFYQAVRNNRSTRRYTRLTEKLD

NT seq 2076 nt +upstreamnt +downstreamnt
atgcgtctgaacgatattgaaagcaagaaagtcgttgtcatcacgggaacatttcccgct
ttgcaacctggcgaaacaatctctgtagaaggcgactggggttcgcatccgaaatacgga
aagcaattccaggcgacttcttttgaatacctcgccaccgaagacaacgatatccttgaa
tacttggcaagcggtcaatttccgggtgtggggcaaaagattgccgaacgcattgtggaa
gcttttggcgatgcaaccgccgacattctcgacaacaatccagacaagttccgcgaagta
aaaatcaaaggcttccccgcccgcaaggtggaagcttttttggcacgttggcaagaagca
cgtcacagccgcgaaacaatgctgttcttgtacaagcacgaaattgtcggcagtgtggca
aagcgcctttggaacaagttcgggcaagcgacaattgaacgcatcacacagaacccgtac
atgctctgcgaagaagtctggggcatcggattcttgaaggccgacgaaattgcgcaaaaa
gtcggattcccgaaagacagccccgagcgttttcaggccgcattgctttacacattgcaa
gaagcgtctgtgagcgatgggcacgtatttttgcccaagaacgtactcctggaacgcacg
ttccgcaacttgcgtttaatgcaggacgatgaaggcgccatcaacacgctcctcgacgaa
ttcgaaaaggcaagcgaatgcgggcgcatcacgcgcgaaggcgacgactgctattttccg
ccgctttacaatgccgagcagcgcatcgcagacaacatcaagctccgtttgcgatacaac
gagctttcaacggaaggcttcgaagacgccctggcgcagtgggaacgcgaacacaagttc
agctttgacccaatccaaaaacgcgctatccagatggcgctctcgcgaaagatatccatc
atcacaggtggaccaggtacaggcaagacgacaatccttaaagggattttgtacctcgcc
cgccaaatggaagaatgcgtaagcctcaccgccccaacggggcgcgccgccaagcgcatg
ggcgaatgctgtggcgagaaagcccgcacaatccaccgattgctcgaagtggacccgatt
tcgggcaagttccaccgcgatggcgacaacaagctccaatgcaatttgctcatcgtcgat
gaattcagtatggtcgatacgtggcttgccgcctcgctcctcgaagcgacgccactcaac
gcgcgaatcgttctcgtgggcgatgccgaccagctccccagcgtgggagctggcaatgtg
ctgaacgacttgttgcgttgccccaagattccgagcacccgccttcagcacattttccgc
caggccggcggaaacgacatcgccgacaaagcatctaaaatcaatcagggcattagcccc
tcgcccatcgaaggaacgaacttccactttttgccctacgagtcggccgatgaagctaaa
gacatcatcgcccgcctcgtcacgcgcggcatcaaggaaaaaatcgacatcaacacgcaa
gagatgcaactcctcacgccgatgcgcaaaggaccgctcggcatttacgaactgaacaac
ttcttgcaagacctcctgaaccccggcaaggaacgcattaaaattgccagcggcaactgg
agcacaggcgaccgcgtgatgcaaatccgcaacaactacgacaagaacgtgttcaacgga
gacgtcggcatcatctacaaaatcgggaaagacacgaaaaaaattaccgtcttttacgat
gacaagaccgtggattacgagcccgacgaagccgatgaacttatccttgcgtacgcctgc
accatccacaagagccagggtagcgaataccccgccgtcatcgtcgtgctagattcaagc
cacagcatcatgctgcagcggaacctcatctacaccgccatcacgcgtgcgaaaggtcat
gtgtggattttgtctgcaccgggagcgttctatcaagccgtgcgcaacaaccgcagcaca
agacgatacacacgcctcaccgagaagttggattag

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-FSU (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (30)   
   Pfam (30)   
All databases (40)   

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