KEGG T01530: FsymDg

Frankia symbiont: FsymDg_3116

Entry

FsymDg_3116 CDS T01530

Definition

UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)

Orthology

K01928

UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]

Organism

fsy Frankia symbiont

Pathway

fsy00300	Lysine biosynthesis
fsy00550	Peptidoglycan biosynthesis

Class

Metabolism; Amino acid metabolism; Lysine biosynthesis [PATH:fsy00300]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:fsy00550]

SSDB

Motif

Pfam:

Mur_ligase_M Mur_ligase_C Mur_ligase

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(3702482..3704209)

AA seq 575 aa
MTSPVLRPVASPARALTELTVGYDGLAVTGGAVAGVVVRGITHDSRAVRPGDLYAALPGA
RAHGAAFVRQAVAAGAVAVLTDRAGADQIAATARSVGTGTGGGVAGGSGATGSGPVAGSG
VAASAGVPGGAGAAGSDGGSVADGAVAAGVGVADVPVLVAADPRALLGPVAARVYGDPSA
ALTLLGVTGTNGKTTVAYLLEAGLRAAGHTTGLIGTVQTRLAGTVLPSVRTTPEATDLQA
LLAVMAERGVTAAAMEVSSHAVALHRVGGIRFAGAAFTNLSQDHLDFHPSMEDYFAAKAA
LFTPERTGVSVIDTDTPWGRQLAAAVPGAITCGTAADAHWRAVDVTAGPTGTTFRALGPH
GVDVRVGIALPGAFNVGNALVALALLVATGVPAPVAAAGLASLPGVPGRMERVDAGQPFL
GLVDYAHTPDAVQTLLRTVRPLVSGRVIVVLGCGGDRDRRKRPLMGAAAAAGADLAIFTS
DNPRSEDPELIIAQMCTGVGTLPPSARGRVMVEPDRAAAIRRAVGFARPGDAVVLAGKGH
ETGQEQAGVVTPFDDRDVLRAELAGWRPVSRQHLA

NT seq 1728 nt +upstreamnt +downstreamnt
gtgacctcaccggtgttgcgtccggtcgcctcgcccgcacgggcgctcaccgagctgacc
gtcggatacgacggtctcgcggtgaccggcggtgctgtggcgggtgttgtcgtccgcggg
atcacccacgactcccgcgcggtgcgtcctggcgacctgtacgcggccctgcccggcgcg
cgcgcacacggggccgccttcgtccggcaggcggtcgcggccggggccgtggccgtgctg
accgaccgggccggcgccgaccagatcgcggcgacggcccggtcggtcggcacgggcacc
ggcggcggcgtggccggcggtagcggcgcgaccggcagcgggcccgtggccggcagcggt
gtggccgccagcgcgggcgtgcctggcggcgcgggcgcggccggtagcgacggcgggagc
gtggctgacggcgctgtggccgccggcgtgggtgtggccgacgtcccggtgctcgtggcc
gcggacccgcgggcgctgctggggccggtcgccgcccgggtgtacggcgacccgtcggcg
gccctgacgctgctgggggtcaccggcaccaacggcaagacgacggtggcctacctgctg
gaggcggggctgcgggccgccgggcacacgaccgggctgatcgggacggtgcagacgcgg
ctggccggcaccgtgctcccctcggtgcgcaccaccccggaggccaccgacctgcaggcg
ctgctcgcggtcatggccgagcgtggggtgaccgcggcggcgatggaggtctccagccat
gccgtcgccctgcaccgggtgggcggcatccgtttcgccggggcggcgttcaccaacctc
agccaggaccatctcgacttccatccgtcgatggaggactatttcgccgccaaggccgcc
ctgttcacccccgagcggaccggggtgtccgtcatcgacaccgacacgccgtgggggcgc
cagctcgccgccgccgtcccgggcgcgatcacctgcgggacggccgccgacgcgcactgg
cgcgccgtcgacgtcaccgccggccccaccgggacgaccttccgcgcgctcggcccgcac
ggcgtggacgttcgggtgggcatcgcgctgcccggggccttcaacgtcggcaacgccctg
gtggcgctggcgctgctggtggccaccggtgtccccgcaccggtggcggcagcggggctg
gcgagtctgccgggtgtgccgggcaggatggaacgggtcgacgccggccagccgtttctc
ggcctggtcgactacgcgcacacaccggacgcggtacagacgctgctacgcaccgtacgg
ccgctggtgtccggccgtgtgatcgtggtgcttggctgcggcggtgaccgtgaccggcgc
aaacgtccgctgatgggcgccgccgcggccgccggcgccgaccttgcgatcttcaccagt
gacaacccccggtcggaggatccggaattgatcatcgcgcagatgtgtaccggcgtgggg
acgttgccgcccagtgcccgcggccgggtcatggtggaaccggaccgggccgcggcgatc
cgccgcgcggtgggcttcgcccggccgggagacgcggtcgtgctcgccggcaaggggcac
gagaccggccaggagcaggccggcgtggtgacacccttcgacgaccgtgacgtgttgcgg
gcggagctggccgggtggcgtcccgtgtcgcgccagcacctggcgtga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-FSY (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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