KEGG   Francisella tularensis subsp. tularensis FSC198: FTF1387c
Entry
FTF1387c          CDS       T00381                                 
Symbol
ligN
Name
(GenBank) DNA ligase
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
ftf  Francisella tularensis subsp. tularensis FSC198
Pathway
ftf03030  DNA replication
ftf03410  Base excision repair
ftf03420  Nucleotide excision repair
ftf03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ftf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FTF1387c (ligN)
   03410 Base excision repair
    FTF1387c (ligN)
   03420 Nucleotide excision repair
    FTF1387c (ligN)
   03430 Mismatch repair
    FTF1387c (ligN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ftf03032]
    FTF1387c (ligN)
   03400 DNA repair and recombination proteins [BR:ftf03400]
    FTF1387c (ligN)
Enzymes [BR:ftf01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     FTF1387c (ligN)
DNA replication proteins [BR:ftf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     FTF1387c (ligN)
DNA repair and recombination proteins [BR:ftf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     FTF1387c (ligN)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     FTF1387c (ligN)
   MMR (mismatch excision repair)
    DNA ligase
     FTF1387c (ligN)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      FTF1387c (ligN)
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD PTCB-BRCT BRCT_2 HHH RNA_ligase
Other DBs
NCBI-ProteinID: CAL09403
UniProt: Q14GL3
Position
complement(1431030..1433066)
AA seq 678 aa
MTPNEFFSIKYHILAKAELKAYIDKLADYLSQQSYLYHTLDKPIISDSDYDKLFRLLQDL
VNDNPQFKPINSVLDRVGGEVLAGFETIKHKKKMTSLANVFSLEELRDFYDKIEYDIELE
CEPKMDGLAISIFYKNGKFDYAVTRGDGIQGEKVSENVKTIRNVPLKLNTSNPPEELEVR
GEIILDKQSFLSLNEYMQTHENKTFANPRNAAAGSIRMLDSKVVAKRPLKLYSYGIGYFS
KDFVYPETQFELMQLLQSFGFTISDNMFLAKNFSEVEEYHHKMSHQRADLAYDIDGLVFK
VNNIKLQDTIGYTARGPKWAIAYKFPAEEVESEVLNVEFQVGRTGAITPVARLKPVAVGG
VIVSNATLHNINEIKRKDIRVGDRVIVRRAGDVIPEVVKSLPQYRKSDAQMVEMPTNCPV
CDSKIENVNDQAIYRCTGGWHCQAQTTERLKHFVSRKAMDIDKLGAKLIEQLVAANLIKY
PADIYKLNFEQLTGLERMAAKSSQNVLDSITKSKEPSLARFIFAIGIKDIGEVSSDALAN
HFGSLESFRDAKFEELIEINDIGEIMANNIVSFWHDSLNIKIVEEFLAIGIKIQNPVKVE
HAYNESFTGKTVVITGSFENYGRTELTQLLKSIGAKVTSSVSKKTDMVICGDNAGSKLTK
AQELGVEVILEDNLKDLL
NT seq 2037 nt   +upstreamnt  +downstreamnt
atgactccaaacgaatttttttctataaaatatcatattttagctaaagcagaattaaaa
gcttacatagacaaattagctgattatcttagtcaacagagctatttgtatcatacctta
gataagccaattatttctgactctgattatgataagctgtttagattacttcaagattta
gttaatgacaatccccaatttaagccgataaattcagtattagatcgtgttggaggtgag
gttttagcagggtttgaaactatcaagcataaaaagaaaatgacatctttggcaaatgtt
tttagtctagaggagttgcgtgatttttatgacaagatagagtatgacattgagcttgaa
tgtgaaccaaaaatggacggtctagcaatcagcattttttataaaaatggtaagtttgat
tatgctgttacacgtggtgatggtattcagggtgaaaaagtttcagaaaatgttaaaact
atccgcaatgtcccacttaaactaaatacttcaaaccctccagaagaactagaagttcgt
ggtgagattatcttagataagcaaagttttctatctcttaatgagtatatgcaaactcat
gagaataaaacttttgcaaatccgcgaaatgcagcagctggaagtattcgtatgcttgac
tcaaaagttgtagcaaagcgaccacttaagctttatagctatggtattggctatttttct
aaagactttgtatatcctgaaacccagtttgaactaatgcagctactccaaagttttggc
tttacaattagtgataatatgtttttggcaaaaaatttctcagaggttgaggagtatcac
cataagatgagtcatcagcgtgctgatttagcttatgatattgatggtttagtttttaag
gttaataatattaaactacaagatacaattggctacactgctagaggacctaagtgggct
atagcatataagttcccagctgaagaggtggagtcagaagtgctaaatgtagaattccaa
gttggcagaacaggagcaattacgccagtagcaagacttaagccagtcgcagttggcggc
gtaatagtttcaaatgcaaccttgcacaatatcaatgaaattaaacgcaaagatatccga
gttggtgatagagtaatcgtacgtagagcaggagatgtaattccagaagtggtcaaaagc
ttaccacaatatcgtaagtctgatgcacagatggttgaaatgccaacaaattgtccagtt
tgtgattcaaagattgagaatgttaatgatcaggctatatatcgttgtacaggaggatgg
cattgtcaggcacaaactactgagcgcttgaagcacttcgtctcacgtaaagcaatggat
attgataagcttggagctaaactaattgaacaacttgttgctgcaaatttaattaagtat
cctgctgatatttacaaactcaattttgagcaattgacaggcttagaaagaatggctgct
aaatcatcacaaaatgtcttagactctatcacaaaaagtaaagagccaagtttagcaagg
tttatttttgcaatagggattaaagatatcggtgaagtatcatcagacgctttagcgaat
cattttggtagtctagagagcttccgtgatgctaagtttgaggagctaatagagattaat
gatattggtgagattatggctaataatattgtttcattttggcatgattctctaaatatt
aagattgtagaagagtttttagctattgggattaagatacaaaatccagtaaaagttgaa
cacgcctataacgagagcttcacaggtaaaactgttgttattactgggtcttttgagaac
tatggtcgtacagaacttacacagcttcttaagtcaatcggggcaaaagttacctcaagt
gtttctaaaaaaactgacatggttatttgtggcgataatgctggtagcaaacttacaaaa
gcccaagaattaggtgtagaagttattcttgaagataatctgaaagatttattatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (10)   
   Pfam (10)   
All databases (31)   

Download RDF
DBGET integrated database retrieval system