KEGG   Francisella tularensis subsp. tularensis TIGB03: FTU_1232
Entry
FTU_1232          CDS       T01762                                 
Symbol
uvrB
Name
(GenBank) Excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
ftg  Francisella tularensis subsp. tularensis TIGB03
Pathway
ftg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ftg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    FTU_1232 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ftg03400]
    FTU_1232 (uvrB)
DNA repair and recombination proteins [BR:ftg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     FTU_1232 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      FTU_1232 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII DEAD UVR Kinesin AAA_30 Microtub_bd SWI2_SNF2 AAA_22 Methyltransf_25 eIF3_p135 DUF87 AAA_33 GerPC
Other DBs
NCBI-ProteinID: AFB79254
Position
complement(1291961..1293967)
AA seq 668 aa
MNKFNLVTKYAPAGDQPQAIQSLVNGINTGLQHQVLLGVTGSGKTYTMANVIQQTQKPCL
ILAHNKTLAAQLYSEFKQYFPDNAVEYFVSYYDYYQPEAYIAASDTYIEKDSSVNEHIEQ
MRLSATKAILERNDVIIVATVSAIYGLGDPEQYMQMLLHLKVGEELGLKKAQTKLVEMQY
SRNDMDFSRGSFRVRGEVLDIFPADSEKDAIRVEFFDDEIEAISVIDSLTSKKLKSLHRA
TIFPSTHYVASKERKEIVIEDIKKELKERVKYFEKEGKLLEAQRIEQRTKYDIEMIQELG
YCTGIENYSRLLSGRAPGYPPPTLIDYLPENALVIVDESHVTLPQFGGMYKGDLSRKSNL
VNYGFRLPSALDNRPLKFNEFESLLPQTIYVSATPANYELEKSQNTVQQVIRPTGLLDPE
VFVRPVAIQVEDALSEINKAIAKEERVLITTLTKKMVENLTEYLSEHGVNVRYLHSDIDT
VERVQIIHDLRHGVFDVLVGINLLREGLDMPEVGVLLIFDADKEGFLRSEKSLIQTIGRV
ARNQNGRAILYADVVTKSMQKAMDETLRRRKLQDEYNQKHNIVPKTIIKNIDDMLDSSPE
MQKRAYKNNLRLKVDDVDVSAILGMTEATKVIKALEKRMRAYAKELEFEKATTIRDKITE
VKQKFINL
NT seq 2007 nt   +upstreamnt  +downstreamnt
atgaataaattcaacctagtaacaaagtatgctccagctggcgatcagcctcaagcaata
caaagccttgttaatggtataaatactgggttacaacaccaagtattgcttggtgtgaca
ggctctggtaaaacatatactatggcaaatgttattcaacagactcaaaaaccatgcttg
atattagcgcataataaaactctagctgcacaactgtattctgagtttaaacaatacttt
ccggataatgcagttgagtattttgtgtcatattatgattattatcaaccagaagcgtat
attgccgcatcagatacctatatagaaaaagattcttctgtaaatgagcatattgaacaa
atgcggttgtcagcaaccaaggcaatacttgagcgaaatgatgtaataattgttgcaact
gtatcagctatatatggtctaggtgatcctgagcagtatatgcaaatgcttttgcaccta
aaggtaggcgaagagttaggactaaaaaaggcgcaaactaagctagtagagatgcaatat
tcacgtaatgatatggattttagtcgtggaagctttcgcgtacgtggagaggttttagat
attttccctgctgactctgagaaagatgctattcgagtagaattttttgatgatgaaata
gaagcaataagtgtaattgattcattaacctcaaaaaaactcaaatcattacatcgagca
acaattttccctagtactcattatgtggcatctaaagaacgtaaagagatagttattgag
gatatcaaaaaagaacttaaagaaagagttaagtattttgaaaaagagggaaaacttctt
gaagctcaaagaatagaacaacgtactaagtatgatattgaaatgattcaggaacttggc
tactgtacaggaatcgaaaattactcaaggttactttctggaagagctcctggttatcca
ccacctactttgattgattatctcccagagaatgccttagtgatagttgacgagtcacac
gtgacattaccgcagtttggaggaatgtataagggtgatttatcacgtaaatcaaacctt
gtaaactatggtttccgtcttccttctgctttagataataggcctttgaaatttaatgag
tttgagagtctgttgcctcagacaatctatgtatcggctacacctgctaattatgagcta
gaaaagtctcaaaatactgtacagcaagtgattagaccaactggtttattagatccggaa
gtttttgtaagaccagtagcgatacaggtagaagatgctttatctgagataaataaagca
attgctaaagaagaaagagttttgataacgactttaaccaaaaaaatggtagaaaacctt
acagagtatttatctgagcatggagttaatgtcagatacttacattcagatattgatact
gtcgaaagggtgcagattattcatgatttacgccatggtgtttttgatgtgcttgtcggg
attaaccttcttagggaaggtcttgatatgccagaggttggtgttttattaatttttgat
gcggataaagaaggtttcttacgttctgaaaaatctttaattcagacgattggacgtgta
gcaagaaatcaaaatggtcgagctattttatatgctgatgtagtgacaaaatctatgcaa
aaagctatggatgagactttgcgccgtcgtaaactccaagatgaatataatcaaaaacac
aatatagtcccaaaaactattattaagaatattgatgatatgctagacagctctccagag
atgcaaaagcgcgcttataaaaataatttgcgcttaaaggttgatgatgttgatgtttcg
gctatactaggtatgactgaagctacgaaggttatcaaagctctcgaaaagcgtatgcga
gcttatgcaaaagagctcgaatttgaaaaagctacaactattagagacaagataactgaa
gtaaagcagaagtttattaacttataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (16)   
   Pfam (16)   
All databases (23)   

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