KEGG   Francisella tularensis subsp. holarctica FSC200: FTS_0671Help
Entry
FTS_0671          CDS       T02350                                 

Gene name
recD
Definition
(GenBank) exodeoxyribonuclease V, alpha subunit
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
fti  Francisella tularensis subsp. holarctica FSC200
Pathway
fti03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fti00001]
 Genetic Information Processing
  Replication and repair
   03440 Homologous recombination
    FTS_0671 (recD)
Enzymes [BR:fti01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     FTS_0671 (recD)
DNA repair and recombination proteins [BR:fti03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     FTS_0671 (recD)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: AAA_30 AAA_19 Viral_helicase1 AAA_11 UvrD_C_2 Helicase_RecD AAA_22 UvrD-helicase DUF2075 UvrD_C ResIII PhoH NACHT DEAD Flavi_DEAD T2SSE TIP49 TrwB_AAD_bind AAA_12 Terminase_6 NTPase_1 AAA_28 SRP54 AAA_24 AAA_33 AAA_16 NIL
Motif
Other DBs
NCBI-ProteinID: AFT92555
Position
659251..661119
Genome map
AA seq 622 aa AA seqDB search
MLVYLMEMIMYKTFHKACEQLADIRAIDFFFAKEVFDLVKKTTPSMTTLSSESYPPFHGA
KGNDLEQKSNEILFHILMKLMHVYSHGHSCLKIADISNKTIFASEQSNQSDAKVGFKMPS
SDKIASILDNLNYDNLPIYFAKQYDSLYIKRLWNYENEIANFIKLKTIQNTQKDNRIEEV
VDKLFEPAGEINWQKQAVIKSLNYNFSIISGGPGTGKTTTVAKLLLAIQMLNQNQQRIAL
LAPTGKAAQRMTESLKNTLATVIPSSLTTESTIQKNDIFKQVQDELNSVAQYLNNLEAQT
IHRFLGLRPNSTYVKYNQQSKAPFDVIIVDEASMLDMNIFIKLIRAVADNTKLILIGDTN
QLPSVEAGSLLANFTHDKYGSITPYTTLLIKNYRSQQYINNLAASVLKGDVNIDSQQNEN
IKFHSLRNLDIYLREYAKRYSQLEKCRDYKEALTELNKFRILVANKNLEIGTDKLNQKIE
KFMSKPIDSNYKGKPIMITQNSYSLGLFNGDVGIMWPDDTGKLRAYFDGKDAKAFSLNML
PKYESVYAMTIHKTQGSEFDEIVIILPAEDNEALSKQLLYTAITRAKYKLTIISEQSSLR
DIAQKDINRNSNISELVSLSTQ
NT seq 1869 nt NT seq  +upstreamnt  +downstreamnt
ttgctagtttatttaatggagatgataatgtataaaactttccataaagcttgtgagcaa
ttagcagatattagagccatagattttttctttgctaaagaggtgtttgatttagtcaaa
aagactactccgtctatgaccactttatcaagtgagtcatatccaccctttcacggagca
aaggggaatgatttggaacaaaaaagtaatgaaattttatttcatattttgatgaagctt
atgcatgtgtatagtcatggtcatagctgtttgaagatagcagatatatcaaataaaact
atttttgcttcagagcaaagtaatcagagtgatgctaaagtaggctttaaaatgccaagc
tctgataaaattgcaagtattttagataacttaaattacgataatttacctatatatttt
gccaaacagtatgattctttgtatattaaaagattgtggaattatgagaatgaaatagct
aactttataaaattaaaaacaatccaaaatactcaaaaagacaatcgtattgaagaagtt
gtagacaaactatttgaacctgctggtgaaatcaactggcaaaaacaggcggttatcaaa
agtctaaattataattttagtattatctcaggtggacctggtacaggtaagacaactaca
gtcgcaaagcttttacttgctatacaaatgcttaatcaaaatcagcaaagaatagcgctt
ttagcaccaactggtaaggctgctcagagaatgacagagtcattaaaaaatactctagca
actgtcattccgtcaagcttgaccacagaatctactatacaaaaaaatgatatctttaaa
caagttcaggatgaacttaatagtgttgctcagtatcttaataatctagaagcacaaact
atacatagatttttaggcttaagaccaaactctacttatgttaaatataaccaacaatct
aaagctccattcgatgttattattgttgatgaagcttcgatgcttgatatgaatattttt
atcaagttaattagagctgtagcagataatactaagttgatattaataggtgatactaat
cagttaccatctgttgaggctgggagtcttttagcaaactttacacatgataaatatggt
agcattacgccatatacaacattacttatcaaaaactatcgttcacaacaatatataaat
aatcttgcagcctcagtcctaaaaggcgatgttaatattgatagtcaacaaaatgaaaat
attaaatttcatagtctaagaaatttagatatttatttaagagagtatgcaaagagatat
tcacagcttgaaaagtgccgtgactacaaagaggctcttacagagctgaataaatttaga
atacttgtggctaacaaaaacctagaaattggtacagataagttaaatcagaaaattgag
aagtttatgtctaagcctatagattctaactataagggtaaaccaattatgataactcaa
aatagttattcattagggttatttaatggagatgtagggattatgtggcctgatgatact
ggtaagctccgagcatattttgatggtaaagatgctaaggcatttagtctaaatatgcta
ccaaaatatgaaagtgtttatgcgatgacaattcataaaactcaaggctcagagtttgat
gaaatcgtgattattcttccagcagaagataatgaagcgctaagtaaacaacttttgtat
acagctattactagagcaaaatataaattaacgattatatctgaacaaagtagcttaaga
gatattgctcagaaagatattaatagaaattcaaatatcagtgaattagttagcttgagc
actcaataa

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