KEGG   Francisella tularensis subsp. holarctica F92: F92_08540Help
Entry
F92_08540         CDS       T02349                                 

Definition
formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
fts  Francisella tularensis subsp. holarctica F92
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:fts00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    F92_08540
Enzymes [BR:fts01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     F92_08540
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     F92_08540
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
1464842..1465666
Genome map
AA seq 274 aa AA seqDB search
MPELPEVETVKRGLIKTIIDKKIFDIEINTDKLRYPIDKDQLVKIKNKVVKEIQRRGKHL
IIFIKDDLQLIIHLGMSGIIKVIDSTNYNKIKHDHIVVTLSDNLSLVYNDPRKFGYWLVN
TNHTPLEHRVLVSHGVEPLTADFNSDYLVSKLKQTSRKIKQTIMDNNIVVGVGNIYASEA
LFDSNILPTRASNTITKKEAANLVSSIKKILEKAITQGGTTLKDYKNTEGKPGYFTQQLN
VYGRNEQQCYVCNTKIQSLVIAQRNTFFCKKCQK
NT seq 825 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaacttcctgaagtagaaacagtaaaaagaggcttaattaaaactattatcgat
aaaaagatatttgatattgagattaataccgataagcttcgctaccctattgataaagac
caattagtaaaaattaaaaataaagtagtcaaagaaatacaacgcagaggtaagcattta
ataattttcattaaagatgatttacaattaattattcacttaggcatgtctggaattatt
aaagttatagactcaacaaactacaataaaatcaaacatgatcacatcgttgtaacgcta
tcagataatctatctttagtttacaatgatccacgtaaatttggttattggttagtaaat
actaatcacacacctcttgaacatagagttttagtatcacatggtgttgaaccactaaca
gctgattttaatagtgactatctagtttctaaacttaagcaaacatcaagaaaaatcaaa
caaacgattatggataataatattgtcgttggtgtgggtaatatatatgctagtgaggcg
ctatttgatagtaatatcctaccaacaagagcttctaatactattaccaaaaaagaagca
gctaacctagtatcatctataaaaaaaatactggaaaaagctattacacaaggtggaacc
actcttaaagattataaaaacaccgagggtaaacccggttattttactcaacaactaaat
gtctatggtagaaatgaacaacaatgttatgtatgtaatacaaaaatacaaagtctagtt
atagctcaaagaaatacttttttttgtaaaaagtgtcagaaataa

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