KEGG T03714: CH67

Francisella tularensis subsp. holarctica VT68: CH67_1065

Entry

CH67_1065         CDS       T03714

Symbol

gidA

Name

(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA

K03495

tRNA uridine 5-carboxymethylaminomethyl modification enzyme

Organism

ftv Francisella tularensis subsp. holarctica VT68

Brite

KEGG Orthology (KO) [BR:ftv00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ftv03016]
    CH67_1065 (gidA)
   03036 Chromosome and associated proteins [BR:ftv03036]
    CH67_1065 (gidA)
Transfer RNA biogenesis [BR:ftv03016]
Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    CH67_1065 (gidA)
Prokaryotic type
    CH67_1065 (gidA)
Chromosome and associated proteins [BR:ftv03036]
Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    CH67_1065 (gidA)

SSDB

Motif

Pfam:

GIDA GIDA_C GIDA_C_1st FAD_oxidored Pyr_redox_2 FAD_binding_2 AlaDh_PNT_C Pyr_redox HRDC HI0933_like Pyr_redox_3

Other DBs

NCBI-ProteinID:

AJI65907

UniProt:

A0A0B3VDJ7

Position

complement(954903..956786)

AA seq 627 aa
MIYDYGYDVIVVGGGHAGVEAASASARIGAKTLLLTHNIDTIGQMSCNPAIGGIGKGHLV
KEIDAMGGVMAKAIDMAGIQFRILNSRKGPAVRATRAQADRVLYKKAINSLINNQENLDI
FQDSVDDLVVENNTVCGAITKTGITFRAKKVVLTVGTFLGGKIHIGKVSNAGGRAGDQPS
NALAARLRSLPFRVDRLKTGTPPRIDRRSVDFSVMEVQHGDNPTPYFSFFSKGKIEHPRQ
IPCYITYTNNETHKIITDNLDKSAMYSGLIEGIGPRYCPSIEDKVVRFADKERHQIFVEP
EGLNSIELYPNGLSTSLPFEVQCNYIRSIKGFEKAFIMRPGYAIEYDFFDPRDLKPTLET
KHIKNLYFAGQINGTTGYEEAGAQGLVASINAAISIDSDKSWYPTRADSYIGVLIDDLIT
KGTKEPYRMFTSRAEYRLILREDNADLRLSDKACELGLLSKEDQQHFISKKNAIIENIAM
MKNTWIGPQTQKARDLEKFLDKKMTRESTLFDLLKRPEIDYSKLQQISELNLNLQDDAVI
EQIEISAKYSGYIERQNKDIEKTATLEQKAIPTDFNYSQVKGLSNEVLQKLTEQKPTTLG
EASRIPGITPAAISLLTIYMKKTGFIK

NT seq 1884 nt +upstreamnt +downstreamnt
atgatttatgattatggttatgatgttatagttgttggtggtggtcatgcaggtgttgaa
gctgcttcagcgtcagctcgtataggtgcaaaaactctgctactaacacacaatattgat
actattggacaaatgtcttgcaaccctgctattggtggtattggcaaaggtcatctagtc
aaagagatagatgctatgggtggtgtcatggcaaaggctatcgatatggctggtatccaa
tttagaatacttaattcccgtaaaggaccagctgtacgcgccacaagagcacaagcagat
agagtattatacaaaaaagctataaattctcttatcaataatcaagaaaaccttgatatt
ttccaagactctgtagatgatttggttgttgaaaataatactgtatgtggcgctattacg
aaaacaggtattacatttagagcaaaaaaagtagtacttactgttgggacgtttttaggt
ggcaaaatacatattggtaaagtctctaatgctggtggtagagctggagatcagccatca
aatgcactagctgccagacttagatcattaccttttagagtagatagacttaaaactggt
acgcctcctcgtatagatagacgctcagtagattttagcgttatggaagtccaacatggt
gataatcctactccttacttctcatttttctcaaaaggtaagatagagcatccgagacaa
ataccatgctatattacttacactaataatgaaacacataaaattatcactgataacctt
gataaatcagcgatgtacagtggtttaatagagggtattggtccacgctattgtccttct
attgaagacaaagtagttagatttgctgacaaagaaagacatcaaatctttgttgaacca
gaaggtttaaatagtatcgagttgtacccaaatggtttatcaactagtttaccttttgaa
gttcaatgcaactatatccgctcaattaaaggttttgaaaaagcttttataatgcgccca
ggctacgcaattgaatatgatttttttgacccaagagatctaaaaccaacactagaaact
aagcatatcaaaaatctatattttgctggtcaaattaatggtactacaggctatgaagaa
gctggtgcccaaggtttagtagctagtattaatgctgctattagcatagatagtgacaaa
tcatggtatccaactcgtgctgatagttacatcggcgtattgattgatgatctgattact
aaaggtacaaaagagccatatagaatgtttacctcacgtgccgagtatagacttattcta
cgtgaagataatgctgatttacgcctttctgataaagcttgtgaactaggacttttaagc
aaagaagatcaacaacactttatcagcaagaaaaatgctataattgaaaatatcgcaatg
atgaaaaacacttggataggcccacaaacacaaaaagctcgtgatctagaaaaattctta
gataagaaaatgacacgtgaaagtactttatttgacttactcaaaagaccagaaatagat
tacagtaagttacaacagatatctgagctaaatctaaacttacaagatgacgctgtcatc
gaacaaatagaaatttcagcaaaatactctggctatattgagcgccaaaataaagatatt
gaaaaaacagcaactcttgaacaaaaagctatcccaacagatttcaactattcgcaagtt
aagggattatctaatgaagttctacaaaaattaacagaacaaaaacctactactctaggc
gaagcatcacgtatcccaggtataactcctgcagctatatcattgttgactatatatatg
aaaaaaactgggtttataaaatag

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (28)   

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