KEGG   Francisella tularensis subsp. novicida U112: AW25_1778
Entry
AW25_1778         CDS       T03874                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
ftx  Francisella tularensis subsp. novicida U112
Pathway
ftx03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ftx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    AW25_1778 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ftx03021]
    AW25_1778 (rpoA)
   03400 DNA repair and recombination proteins [BR:ftx03400]
    AW25_1778 (rpoA)
Enzymes [BR:ftx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     AW25_1778 (rpoA)
Transcription machinery [BR:ftx03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     AW25_1778 (rpoA)
DNA repair and recombination proteins [BR:ftx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      AW25_1778 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_CTD RNA_pol_A_bac RNA_pol_L POLH-Rev1_HhH Aconitase_B_N DUF4611 RAD51D_N
Other DBs
NCBI-ProteinID: AJI60954
UniProt: A0A6N3JC61
Position
complement(1858499..1859470)
AA seq 323 aa
MSNNNSKQEFVPNIQLKEDLGAFSYKVQLSPVEKGMAHILGNSIRRVLLSSLSGASIIKV
NIANVLHEYSTLEDVKEDVVEIVSNLKKVAIKLDTAIDRLDLELSVNKSGVVSAGDFKTT
QGVEIINKDQPIATLTNQRAFSLTATVSVGRNVGILSAIPTELERVGDIAVDADFNPIKR
VAFEVFDNGDSETLEVFVKTNGTIEPLAAVTKALEYFCEQISVFVSLRVPSNGKTGDVLI
DSNIDPILLKPIDDLELTVRSSNCLRAENIKYLGDLVQYSESQLMKIPNLGKKSLNEIKQ
ILIDNNLSLGVQIDNFRELVEGK
NT seq 972 nt   +upstreamnt  +downstreamnt
gtgagtaataataattcaaaacaggaatttgtacctaatatacagcttaaagaagactta
ggagcttttagctataaagtccaactttctcctgtagaaaaaggtatggctcatatcctt
ggtaactctattagaagggttttattatcttcactatcaggtgcatctataattaaagta
aacatcgctaatgtactacatgagtattctactttagaagatgtaaaagaagatgttgtt
gaaattgtttctaatttgaaaaaggttgcgataaagcttgatacagctatagatagacta
gatttagaactatctgtaaataaatcaggtgtagttagcgctggagattttaagacgact
caaggtgtagaaataataaataaagatcagccaatagctactttgacaaaccaaagagca
tttagcttaactgctacagtgagtgtaggtagaaatgtcggaatactttctgcgatacca
accgagcttgagagagttggtgatatagctgtagatgctgattttaatcctattaaaaga
gttgcttttgaggtttttgataatggtgatagtgaaactttagaagtatttgtaaagaca
aatggtactatagaaccactagcagctgttacgaaagctttagagtatttctgtgagcaa
atatcagtatttgtatctctaagagtacctagtaatggtaaaacaggtgatgtattaata
gattctaatattgatcctatccttcttaagccgattgatgatttagagctaactgtcaga
tcatctaactgtctgcgtgcagaaaacattaagtatcttggtgatttagtacagtattct
gaatcacagcttatgaagatacctaacttaggtaagaaatctctcaatgagatcaaacaa
attttaatagataataacttgtctctaggtgtccaaattgacaattttagagagctagtt
gaaggaaaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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