KEGG T03875: CH70

Francisella tularensis subsp. novicida DPG 3A-IS: CH70_753

Entry

CH70_753          CDS       T03875

Name

(GenBank) hypothetical protein

K01141

exodeoxyribonuclease I [EC:3.1.11.1]

Organism

fty Francisella tularensis subsp. novicida DPG 3A-IS

Pathway

fty03430

Mismatch repair

Brite

KEGG Orthology (KO) [BR:fty00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    CH70_753
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fty03400]
    CH70_753
Enzymes [BR:fty01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     CH70_753
DNA repair and recombination proteins [BR:fty03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     CH70_753
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CH70_753
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CH70_753

SSDB

Motif

Pfam:

RNase_T Exonuc_X-T_C

Other DBs

NCBI-ProteinID:

AJJ47161

Position

771291..772739

AA seq 482 aa
MFSNQTLLFYDLETSGINNSFDQVLQFAAIRTDLDFNEIERFNFFVKLNPDTTPSPMATI
THHISIAQANTGIAEYQAIRKIHKIINAPGTISIGYNTLGFDDEFLRFAFYKNMLPPYSH
QFKNGCSRADLFPIVTCYYLFCNEVLNWPKAIDEGGQEKTSLKLENLNQNNNLYSGGRAH
DAITDVIVTVELAKKLRAANPKMWQFLLAKFNKQNDENTLTQLDVGLEVGDRKYKQAIAV
SGVFGSKNNFISAILDLGQHRHYKNQEIFLRLDSCLFSDFIDEFGSLEAEHWRLTLNKKW
GDIPIILPAKTRFVGKLPQERIELIKANKEFIRNNPETFANFVEYVLEYKYPEIENIDTD
AAIYQSDFMSMADERGCDKFHSLAITQKAQMLNQLPKSYYDRAVRIIGRLDFSKLPAKAQ
MEFQDYLNKIVSLDSDELLIDHKGKTRKTLEDIYQEIEDLRMNYDLTEEQQALLYELEEY
LF

NT seq 1449 nt +upstreamnt +downstreamnt
atgtttagtaatcagactttgttattttatgatttagagactagtggtataaataattct
tttgaccaagtattgcaatttgctgcaattaggactgacttagatttcaatgagattgag
agatttaatttttttgtaaaattaaatcctgacaccacgccatcacctatggcaacaatt
acgcatcatatttctattgctcaagcaaatactggtatagcagaatatcaagcgattcga
aaaattcataaaattatcaatgctccaggaactataagcataggttataatactcttgga
tttgatgatgagtttttgagattcgctttttacaaaaatatgttacctccatatagtcat
caatttaaaaatggttgctcaagagctgatttgtttccaatagttacatgttattactta
ttctgtaatgaagtattaaactggcctaaggctatcgacgagggtggacaagagaaaact
tctctaaaacttgaaaatttaaatcaaaataacaatctctatagtggcggtagagctcat
gatgctattacagatgtgattgttactgtagaattagctaaaaagctaagagccgcaaat
ccaaagatgtggcagtttttgctagcaaaatttaataagcaaaatgatgaaaatacctta
acacaacttgatgttgggctagaggttggggatcgtaaatataaacaagcaatagctgtg
agtggtgtatttggctcgaagaataattttatctcagcaatattggatttaggacaacat
cgacactataaaaaccaagagatatttctacgcttagatagttgtctatttagtgatttt
atagatgagttcggtagtcttgaagctgagcattggcgtctaactttaaacaaaaaatgg
ggcgatatccctattatcctaccagctaagactcgttttgtcggtaagctaccacaagaa
agaatcgagcttatcaaagctaataaagaatttatacgaaataatccagagacttttgct
aactttgttgagtatgttttagaatataaatatccggagatagaaaatattgacactgat
gcggcaatttatcaaagtgactttatgagtatggctgatgagagaggttgtgataaattt
catagcttggctattacgcaaaaggcacaaatgcttaatcaattaccaaaatcttattat
gacagggctgtgcgtataattggtagattagacttttcaaaattaccagcaaaagctcag
atggagtttcaagattatttaaataaaattgttagcctagatagtgatgagttgttgatt
gatcacaaaggcaaaactcgtaaaactctagaagatatttatcaggaaatagaagattta
cgtatgaattacgatctaacagaagagcaacaagctttgttgtatgagttagaggagtat
ttgttttag

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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