KEGG   Francisella tularensis subsp. holarctica 425: CH68_1661
Entry
CH68_1661         CDS       T03715                                 
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
ftz  Francisella tularensis subsp. holarctica 425
Pathway
ftz03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ftz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CH68_1661 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ftz03021]
    CH68_1661 (rpoZ)
   03400 DNA repair and recombination proteins [BR:ftz03400]
    CH68_1661 (rpoZ)
Enzymes [BR:ftz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CH68_1661 (rpoZ)
Transcription machinery [BR:ftz03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     CH68_1661 (rpoZ)
DNA repair and recombination proteins [BR:ftz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      CH68_1661 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AJI66336
UniProt: A0A0B6E0U0
Position
complement(1450656..1450874)
AA seq 72 aa
MARVTVEDCLDKVETRFDLVVLASMRANKILKNGYSESMENEKKEKATVVALREIAESEI
TPEQILRNEIEG
NT seq 219 nt   +upstreamnt  +downstreamnt
atggctagagtaacagtagaagattgcttagataaagtagaaacaagatttgatttagta
gttttagcttctatgcgagcaaataagatactaaaaaatggctactctgaatctatggaa
aatgagaaaaaagaaaaagcaacggttgtggctttaagagaaattgctgagtcagaaatt
accccagaacaaattttaagaaatgagatagaaggataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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