KEGG   Fusobacterium animalis 4_8: HMPREF0409_00469
Entry
HMPREF0409_00469  CDS       T02680                                 
Name
(GenBank) chaperonin
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
fus  Fusobacterium animalis 4_8
Pathway
fus03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fus00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HMPREF0409_00469
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fus03019]
    HMPREF0409_00469
   03110 Chaperones and folding catalysts [BR:fus03110]
    HMPREF0409_00469
   03029 Mitochondrial biogenesis [BR:fus03029]
    HMPREF0409_00469
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:fus04147]
    HMPREF0409_00469
Enzymes [BR:fus01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     HMPREF0409_00469
Messenger RNA biogenesis [BR:fus03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     HMPREF0409_00469
Chaperones and folding catalysts [BR:fus03110]
 Heat shock proteins
  HSP60 / Chaperonin
   HMPREF0409_00469
Mitochondrial biogenesis [BR:fus03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    HMPREF0409_00469
Exosome [BR:fus04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   HMPREF0409_00469
  Exosomal proteins of other body fluids (saliva and urine)
   HMPREF0409_00469
  Exosomal proteins of breast cancer cells
   HMPREF0409_00469
  Exosomal proteins of colorectal cancer cells
   HMPREF0409_00469
  Exosomal proteins of bladder cancer cells
   HMPREF0409_00469
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: AGM23709
UniProt: R9RBY0
Position
complement(1300730..1302349)
AA seq 539 aa
MAKIINFNDEARKKLEIGVNTLADAVKITLGPRGRNVVLEKSYGAPLITNDGVTIAKEIE
LEDPFENMGAALVKEVAIKSNDVAGDGTTTATILAQAIVKEGLKMLSAGANPVFLKKGIE
LAAKEAIEVLKDKAKKIESNEEISQVASISAGDEEIGKLIAQAMAKVGETGVITVEEAKS
LETTLETVEGMQFDKGYVSPYMVTDSERMTAELDNPLILLTDKKISSMKELLPLLEKTVQ
MSKPVLIVADDIEGEALTTLVINKLRGTLNVVAVKAPAFGDRRKAILEDIAILTGGEVIS
EEKGMKLEEATIEQLGKAKTVKVTKDLTVIVDGGGQQKDISARVNLIKAQIEETTSDYDK
EKLQERLAKLSGGVAVIKVGAATEVEMKDKKLRIEDALNATRAAVEEGIVAGGGTILLDI
IESMKDFNETGEIAMGIEIVKRALEAPIKQIAENCGLNGGVVLEKVRMSPKGFGFDARNE
KFVNMIESGIIDPAKVTRAAIQNSTSVASLLLTTEVVIANKKEEEKAPMGAGGMMPGMM
NT seq 1620 nt   +upstreamnt  +downstreamnt
atggcaaaaattataaattttaatgatgaagctagaaaaaaattagaaattggggttaat
acacttgcagatgcagtaaaaattacattaggaccaagaggtagaaatgtagttcttgaa
aagtcttatggagcacctttaattactaatgatggtgttacaatagcaaaagaaattgaa
ttggaagatccatttgaaaatatgggtgcagcattagttaaagaagttgctattaaatca
aatgatgttgcaggagatggaacaacaacagctacaatcttagcacaagctattgttaaa
gaaggattaaaaatgttgagtgctggtgcaaatccagttttcttaaagaaagggattgaa
cttgctgcaaaagaagctattgaagttttaaaagataaagctaaaaaaattgaatctaat
gaagaaatttcacaagttgcatcaatttcagctggtgatgaagaaataggtaaattaatt
gctcaagctatggcaaaagttggtgaaacaggcgtaataactgttgaagaagctaagtct
ttggaaacaactttagaaactgttgaaggaatgcaatttgataaaggatatgtttctcca
tatatggttacagattctgaaagaatgacagcagaacttgataatcctttaatcttatta
acagataaaaagatttcttcaatgaaagaattattacctttgcttgaaaaaactgtgcaa
atgtctaagccagttttaattgtagctgatgatattgaaggagaagctctaacaactctt
gttataaataaattaagaggaactttaaatgttgttgctgttaaagctcctgcttttgga
gatagaagaaaagctatacttgaagatattgctattctaactggtggagaagttatatca
gaagaaaagggaatgaaattagaagaagctactatagaacaattaggaaaagctaaaact
gttaaagttacaaaagacttaactgtaattgttgatggtggcggacaacaaaaagatata
tctgccagagttaatttaataaaagctcaaatagaagaaacaacttctgattatgataaa
gaaaaattacaagaaagacttgcaaaattatctggtggagttgctgtaataaaagttgga
gctgccacagaagttgaaatgaaagataaaaaattaagaatagaagatgctttaaatgct
acaagagcagctgttgaagaaggaatagttgcaggtggaggaactatcttacttgatatc
attgaatcaatgaaagatttcaatgaaactggtgaaatagctatgggtattgaaattgtt
aaaagagctttggaagcacctataaaacaaatagctgaaaactgtggattaaatggtgga
gtagttttagaaaaagtaagaatgtctccaaaaggttttggctttgatgctagaaatgaa
aaatttgtcaatatgatagaatctggaattattgatccagcaaaagttacaagagctgct
atacaaaattctacttctgttgcatctttacttctaacaacagaagttgtcattgcaaat
aagaaggaagaagaaaaagctccaatgggagctggtggaatgatgccaggaatgatgtaa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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