KEGG T05280: FV113G1

Fusobacterium varium: FV113G1_09270

Entry

FV113G1_09270     CDS       T05280

Symbol

recA

Name

(GenBank) recombinase A

K03553

recombination protein RecA

Organism

fva Fusobacterium varium

Pathway

fva03440

Homologous recombination

Brite

KEGG Orthology (KO) [BR:fva00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    FV113G1_09270 (recA)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fva03400]
    FV113G1_09270 (recA)
DNA repair and recombination proteins [BR:fva03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     FV113G1_09270 (recA)
    RecFOR pathway proteins
     FV113G1_09270 (recA)
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    FV113G1_09270 (recA)

SSDB

Motif

Pfam:

RecA RecA_C Rad51 ATPase AAA_16 AAA_24 ATPase_2 AAA_25 AAA CobU

Other DBs

NCBI-ProteinID:

BBA50580

Position

1042117..1043238

AA seq 373 aa
MAAKKNEEMSKEKALDLAIKQISKEFGEGSIMKLGNNLSMNVEVISTGSLNLNIALGVGG
VPRGRIIEVYGAESSGKTTIALHIVAEAQKAGGIAAFIDAEHALDPVYARALGVDVDELL
ISQPDYGEQALEIADMLVRSNAVDIIVVDSVAALVPKVEIDGEMGDQQMGLQARLMSKAL
RKLTATLNKSKTTMVFINQIRDKIGGFGFGPQTTTTGGKALKFYSSVRLEVKRIGSVKQG
DEVIGNETVVKVTKNKVAPPFKEAAFQIMYGKGITRVGEIMEIALNNDIVAKSGAWFSFG
DIRLGQGKENVKARLETEPELFGQIEKKVLEIIEKGGLDTKPSKKKATESTESDESDTLD
FDGDNEETIEEEI

NT seq 1122 nt +upstreamnt +downstreamnt
gtggcagctaaaaaaaatgaagaaatgagtaaggaaaaagcattagatctagctataaaa
caaatatctaaagaatttggagaaggatctataatgaaacttgggaataacctaagtatg
aatgtggaagttatttcaacaggaagcttaaatcttaatatagcattaggagtaggagga
gtaccaagaggaagaataatagaagtatatggagcagaaagttcagggaaaacaacaata
gctctccatattgtagcagaagcacaaaaagctggaggaatagcagcatttatagatgca
gaacatgctttagatccagtatatgcaagagctttaggagtagatgtagatgaactgctg
atatctcagccagattatggagaacaagctcttgaaatagcagatatgcttgtgagatca
aatgctgtagatatcatcgtagttgactcagtagcagctcttgtaccaaaagtagaaatt
gatggagaaatgggagatcagcagatgggacttcaagcaagacttatgtcaaaagctttg
agaaaacttactgcgacgttaaataagtcaaagactacaatggtatttattaatcagatt
agagataaaattggtggatttggctttggacctcaaactacaactactggaggaaaagct
ttaaaattttattcttcagtaagattggaagtaaagagaataggatcagtaaaacaaggt
gatgaggtaataggaaatgaaacagtagtaaaagttacaaaaaataaagtagcccctccg
tttaaagaagcagctttccaaataatgtatggaaaaggaataacaagagtaggggaaata
atggaaatagctttgaataatgatatagtagcaaaatcaggagcttggttcagttttgga
gatattagattgggacaaggaaaagaaaatgtaaaagcaagacttgaaacagaaccagaa
ctatttgggcagatagaaaaaaaagtgttggaaataatagaaaaaggtggacttgatact
aaaccttctaaaaagaaagctacagaaagtactgaatctgatgaaagtgacacattagat
tttgatggtgataatgaagaaactattgaagaagaaatataa

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (17)   

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