KEGG   Fragaria vesca (woodland strawberry): 101292403
Entry
101292403         CDS       T02666                                 
Name
(RefSeq) probable RNA-dependent RNA polymerase 1
  KO
K11699  RNA-dependent RNA polymerase [EC:2.7.7.48]
Organism
fve  Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:fve00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:fve03036]
    101292403
Enzymes [BR:fve01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.48  RNA-directed RNA polymerase
     101292403
Chromosome and associated proteins [BR:fve03036]
 Eukaryotic type
  Gene silencing
   RNA interference (RNAi) pathway
    RDRC (RNA-directed RNA polymerase complex)
     101292403
SSDB
Motif
Pfam: RdRP
Other DBs
NCBI-GeneID: 101292403
NCBI-ProteinID: XP_004297427
Position
LG4:complement(19085490..19089450)
AA seq 1090 aa
MVKTVSLFGFPTVESSEAVTKFLEEYTGKGTVLSVNVLPPKRRGSRSSARVQFTTAECAE
IILALADDKRLRYGKSYLQKAREWKGHIAPRSTVLEELVTLHFGCKISEEKFSVLWTKSD
VSVTFGKDLNYVHLAFSYDCVEYKLELPSDTICQIELHCPCDQFRKFLLIQLRGAPRIYK
KDVTVKNQWVREVDFTPSCCIGQSSSLCLELPFECSLPDLNKSCVHYIENEGQFGLKEGK
TFSGSSALGSILAPPLGIKLPYKILFKINSLVQHGCIPGQALDVNFYYLVDPTSIRIEYI
ECALDKLFNSKECCYEPARWLIKQYNMYMECKRIPQSPAISLDEGFFYVHRVLITPTKVY
FCGPEVNLSNRVLRNYPEDIDNFLRISFVDEDLGKMRSVDLCPRTCCEEEERRTRVYERI
LSVLRDGIVIGEKKFELLAFSGSQLRENSAWMFASRRGLTAQGIRDWMGEFSHIKNVSKY
GARLGQSFSSSRETFSVGSDEIEVIPDVEIERGGTKYCFSDGIGKMSADFAERVARKCGK
SSTPSAFQIRYGGYKGVVAVDPTLSKKLALRNSMCKFKSLNTMLDVISWTKYQPCFLNRQ
LITLLSTLGVRDRVFEKKQNQAMDQLEGILNDPLKAQEALGLMFQGEATNILKEMLNCYK
PNAEPFLSLMLQSLCASKLAELRTKTRIFVHKGRSLMGCLDETGTLEYGQVFVQCSHHTI
FTGNNTTSTASQGNFTVEGKVVVAKNPCLHPGDVRVLMAVDVPALHHMLDCVVFPQKGKR
PHPNECSGSDLDGDDYFVSWDHELIPPRQTNPMNYTPAPTVELDHDVTIEEVAESFTNYI
VNDSLGIISNAHLVTSDTEPHKAMSYKSVKLAELHSHAVDSPKTGAIVKLPPSLRVKAYP
DFMEKTDRSTYESKRVIGKLYRQVKDIALGSHSHSFKSFTREVARRFYDPDMEVDGFKDY
IDDAMRYKSEYDDKLGKLMDYYGIKTEAEILSGNITNVSKFFNKRKDPESINCAVRSLKK
EARAWFFEKPTSGDPSDFGTDISMYAAKASAWYHVTYHHRYWGCYNKGMARDHFLSFPWC
VFDMLIQIKK
NT seq 3273 nt   +upstreamnt  +downstreamnt
atggtcaagacagtgtccttgtttggatttcccactgtggagtcttcagaagcagtgaca
aaatttcttgaggagtatactgggaaaggaactgttctctctgtgaatgttcttcctcca
aaacgtagaggatcaagatcatctgccagagttcaattcacaactgcagaatgtgctgaa
ataatacttgcattagccgatgataaaagactgcggtatggaaagtcttatctgcagaaa
gctcgagaatggaagggtcacatagcaccaagatcaacagtcttggaggaacttgtgaca
cttcactttggatgcaagatatctgaggagaagttttcggtgctttggacaaaatcagac
gtttctgtgacatttggaaaagacctgaattatgtgcacttagctttctcctatgattgt
gttgaatacaagcttgagctcccatctgacactatttgccagattgagctgcattgtcca
tgtgatcagtttagaaagtttcttctcatccagttacgtggtgcccctcggatttataag
aaagatgtgactgtgaaaaatcaatgggttcgagaagttgattttactccatcatgctgc
attggccaatcctcttctctatgcttggaacttccatttgagtgttcgcttcctgatctc
aacaagagttgtgtgcactatatagagaatgagggacagtttggcctgaaggaaggtaag
actttctctggaagttcagcccttggttctattctggctccacccctaggcattaagttg
ccatacaaaatcctgttcaagataaactcattggttcagcatggttgtattccggggcaa
gctcttgatgtcaatttttattacctagtagatcctactagtataagaattgaatatata
gagtgtgccctggacaagctgttcaactccaaggagtgctgctatgaacctgcaaggtgg
cttattaagcagtacaacatgtacatggaatgcaagcggattcctcagtcaccagctata
tccttagatgagggctttttctatgtacacagggttctgattacaccaactaaagtatac
ttctgtggtccagaggtaaatctctccaatcgtgtcttaagaaactatcctgaagatatt
gacaattttcttcgaatttctttcgttgatgaggacttggggaagatgaggtctgtagat
ttgtgtccgcggacatgttgtgaagaagaggaaagaagaactagagtttatgaaaggata
ctttctgttctaagagatgggatagtgattggtgagaagaagtttgagcttctggcattt
tcgggtagtcagttgcgagagaattctgcatggatgtttgcttccagaaggggccttact
gcacaagggataagagactggatgggagagtttagtcacataaaaaatgtgtctaaatat
ggtgccaggcttggtcagtctttcagctcatccagggagacttttagtgttggatcggat
gaaattgaagtcattcctgatgtggaaattgaaagaggcggaaccaaatattgcttctct
gatggaattgggaagatgtctgctgattttgctgaaagagtggcaagaaaatgtgggaaa
agttctactccatccgcctttcaaatccgctatggtggctataaaggtgttgtggcagtt
gatccaacattgtcaaagaagctggcattgagaaacagcatgtgcaagttcaaatcactc
aacacaatgttagatgtcatatcatggaccaagtaccagccttgtttcctcaatcgtcaa
ctgatcacccttttgtccacccttggagttagggatcgtgtttttgagaagaagcagaat
caagcaatggatcagttggaagggattctaaatgatccgctgaaagcacaggaggcactg
ggattgatgtttcaaggagaggccaccaacattttaaaggaaatgctgaattgttacaag
ccaaatgcagagccgtttctctcattgatgctgcagtcattatgtgcatcaaaacttgcc
gaacttcggaccaaaacacggatttttgttcacaaaggaagatctctgatgggatgtctg
gatgaaactgggacattggaatatggtcaggtatttgtgcaatgttctcaccatactatc
ttcactggcaacaacacaacctcaactgcaagccaaggcaattttactgttgagggtaaa
gtagttgttgctaaaaacccctgtctacaccctggagatgtgcgtgttcttatggctgtg
gacgtgccggcgctacaccacatgctggattgtgttgtgttcccacaaaaaggaaagagg
cctcatcctaatgaatgctcaggcagtgatttagatggagatgattattttgttagctgg
gatcatgaactgattcctcctcggcaaactaatccgatgaactatactccagcaccaact
gtggaattggatcacgatgttacgattgaggaagtcgcggagtcttttaccaactacatt
gtaaatgacagcttgggcatcatttcaaatgcacatcttgtcacttcagatactgaacca
cataaggctatgagctataaaagtgttaagctcgccgagctccactctcatgctgttgac
tctcctaaaactggtgcgatagtgaaactgccgcctagtctgcgcgtaaaagcttaccca
gatttcatggaaaagacggaccgatccacctacgagtccaagcgtgtgattgggaagctt
taccgacaggtgaaagatattgcgctaggatcacattcacactcttttaagtcctttacc
agggaagtggctaggaggttttatgatcctgacatggaggtagatggattcaaagattac
atcgatgatgccatgagatacaaaagtgagtatgacgacaagctgggaaagctgatggac
tattatggtattaaaactgaagctgaaatactgagtggaaacatcaccaatgtatcaaag
ttcttcaacaagagaaaggacccggagtcgattaactgtgctgtgaggtcactgaagaag
gaagcaagggcatggtttttcgagaagccaactagtggtgatccatcggattttggaact
gacatcagtatgtatgcggcaaaagcatcagcatggtaccatgttacatatcatcatcgt
tactggggttgctacaacaagggtatggcaagagaccatttcctgagttttccatggtgt
gtgttcgacatgctcatccaaatcaagaagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (35)   

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