KEGG   Fragaria vesca (woodland strawberry): 101296519
Entry
101296519         CDS       T02666                                 
Name
(RefSeq) polygalacturonase-like
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve00040  Pentose and glucuronate interconversions
fve01100  Metabolic pathways
Module
fve_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:fve00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    101296519
Enzymes [BR:fve01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     101296519
SSDB
Motif
Pfam: Glyco_hydro_28 Pectate_lyase_3 NosD Pectate_lyase_4
Other DBs
NCBI-GeneID: 101296519
NCBI-ProteinID: XP_004288736
Position
LG1:1201246..1202790
AA seq 376 aa
MFGLSDAAATYNVMKYGAKADGKSDSTQAFVKTWAAACSSNQTATMYVPKGRFLLKAAVF
RGPCKSRIKVQIYGSLIAPTDYWALGNSGYWILFIKVNRLAVFGGTLDGKGAGFWACRKA
GKSCPVGARSITFNWANDVVISGLVSINSQQTHLVINSCNNVVVRNVKLVAPADSPNTDG
IHVQSSTGVTITGATLQTGDDCVSIGAGTKNLYMSNIKCGPGHGVSIGSLGKEANEAGVQ
NVTLTNAVFSGSDNGVRIKTWARPSNGFVTNVLFRNIMMRNVENPIIIDQNYCPNNNGCP
NQTSGVKISQVTYKNIQGTSATAEAVTFDCSPSNPCRGIRLEDIKLTYMNQLATSSCKNI
DGTSTGVLMPQSCVAS
NT seq 1131 nt   +upstreamnt  +downstreamnt
atgttcgggttatcggatgcagcagcaacttataatgtgatgaaatacggtgcaaaagcg
gacggcaaatcagactcaacccaagcgtttgtcaagacatgggcagcagcatgcagctct
aatcagacagccaccatgtacgtccccaaaggaaggttcttgctaaaagctgcagtgttc
agaggcccttgcaagagtagaattaaagttcagatatacggatccttgattgcccctact
gattattgggcgctaggaaactccggctactggatcctattcattaaggtcaatcgactc
gcagttttcggtggtacactggacggcaaaggagctggcttttgggcttgcaggaaagcc
ggaaagagctgccctgttggagctaggtcgataacgttcaattgggcaaatgacgttgtg
ataagtggtttagtgtcgatcaacagtcagcaaactcatcttgtgatcaacagctgcaac
aatgtggtggtcagaaacgttaagttggttgctccggctgacagccccaatactgatggc
attcatgtgcagagctcaactggtgttactatcaccggcgcaaccttgcaaaccggagac
gattgtgtatcaattggagctggcaccaaaaacctctacatgagtaacatcaagtgcggc
ccaggacatggcgtaagcattggtagtctaggcaaggaagcgaacgaagctggggtccaa
aatgtgacgttaacgaatgcagttttcagtggatcggacaatggagtgcgaataaagaca
tgggccaggcccagcaacgggtttgtgaccaacgttctcttccggaacatcatgatgagg
aatgtcgagaaccccatcatcatcgatcagaactactgcccaaataacaacggttgccct
aaccagacttctggtgtaaagattagtcaagtgacatacaagaacatacaagggacgtcg
gcaacggcggaggcagtaacatttgattgcagcccaagcaatccgtgcagagggattaga
ttggaagacatcaagctcacatacatgaatcaattagccacatcttcatgcaagaacatc
gatggaaccagcacgggagtgctcatgccccagagttgcgtcgcaagttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system