KEGG   Fragaria vesca (woodland strawberry): 101304814
Entry
101304814         CDS       T02666                                 
Name
(RefSeq) DNA mismatch repair protein MLH3
  KO
K08739  DNA mismatch repair protein MLH3
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    101304814
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fve03400]
    101304814
DNA repair and recombination proteins [BR:fve03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     101304814
SSDB
Motif
Pfam: DNA_mis_repair MutL_C HATPase_c_3 HATPase_c
Other DBs
NCBI-GeneID: 101304814
NCBI-ProteinID: XP_011461550
Position
LG1:7742634..7749946
AA seq 1239 aa
MRGVKLLPEAVRSSIRSGVVLYDVARVVEELVFNSLDAGARKVSVFVGIGTCYVKVVDDG
CGITRDGLVLLGERYATSKFGQCSEGDGAGGSFGSRGEALASISDVALLEVVTKASGRPN
GYRKVMKGSKCLYLGVDDDRKDVGTTVVVRDLFYNQPVRRKCMQSSPKKVLDTVKKCVHR
IALVHSKVSFKVVDIESEDELLRTIPSPSPLTLLRTAFGIEVSDALHELNISDGKLELSG
YLSTPCNCLAIKAFQYFYINSRFICKGPIHKLLNQLASSFECWDPGTAVVGSHNRKRSRP
QAFPVYVLNLSCPHSFYDLTFEPSKTYVEFKDWVPVLNFIEKAIQSFWKEKISYVEPACH
GADIRREGRMWEEHDNIVSADENLLDVDLSEMSPIGKKRSRTQDFETSPDIMKILSKEDS
DVSQRRHVSVPFDYLHGNIDDVFKDRASEIDFGHDTDYSFKPRDQSLAKCILRTTLKREN
DSWMSEINVSPDEDYMMDSGCSAAKRSCNVEDNIFSFSKGSAVIGVPHHDSSSDVDVTCD
LRQPFLKSCSSRGRLPSERDLFTESGIKCHNDYIGSKRVWEGSCNTADISEIDGSCKRMC
SGSYKRAEVPDILSMTSSPGRVSSAQPYPRDRSKFDPFAEFDPLSGAYLNSIPSCRELFN
DSSSDIGSYNQTSKTEWYSVTSNPLSQSAYMAFEPFSNEDSDEGCYRYKYDKRDTEKYFV
DAEEFDCSFGSDIVSKITEHCAADIDCGLDYDVKTGFRKFLHQDKIDREIYTGHRDKLAD
ETDWLHWHSRSKDNICIDMHNRHEEQLKYQDSLKNRISVRRSLRSHSAPPLPRSKRKYFT
LNHPAPTESKHDAQPFHDSATYPEAGTMKDLCQPPYGSHQNLMTTSVEDLLLDTRCEESQ
DINAGASKMQRLEMFEQSKRSEVQAMAPNKEIISKNQDSLNCGTKWRNCCPQNTSTSIMH
GSQAGNDILDISSGFLHLAADSLVPESINKNCLKDCRVLQQVDKKYIPVMAGQTLAVIDQ
HAADERIRLEELRLKVLSGDGEAKTITFLDIEQELMLPEIGYQLLHNYAKPIEEWGWRCN
IHAQDSGSFKRNLNILHRQPTVITLIAVPCILGVNLSDVDLMEFLQQLSDTDGSSTMPPS
VLRILNSKACRGAIMFGDSLLPSECSLIVDELKQTSLCFQCAHGRPTTAPLVNLEALHKQ
IAKIASLNQKSGADQGWHGLHRHELSLARAEQRLNSARS
NT seq 3720 nt   +upstreamnt  +downstreamnt
atgagaggcgtgaagctgttgccggaggcggttcggagctcgattcggtctggagtggtt
ctgtatgacgtggctagggttgtggaggagctcgtcttcaatagcttggacgctggagca
agaaaggtgtcggttttcgtgggaattgggacttgctatgtgaaagtagtggatgatgga
tgtgggattactcgtgatggattggtgttgctgggagaaagatatgccacgtcgaagttt
ggacaatgttctgagggggatggtgcgggtgggagttttggttccagaggggaagcattg
gcttcgatttctgacgtggcattgcttgaagttgtcacgaaagcgtcggggaggccaaat
gggtatcgtaaagtgatgaagggatccaaatgtttgtatcttggagtagatgacgatagg
aaggatgtgggcacaacagttgttgttcgtgatttgttttacaatcaaccagttcggagg
aagtgcatgcaatccagcccaaagaaggtactggacactgtcaagaaatgtgtgcacagg
atcgcgctggtgcactcaaaggtttcctttaaagttgttgatatagaaagtgaggatgag
cttcttcgtaccattccttctccttctcccttgacattattgagaactgcttttgggatc
gaggtctctgatgcacttcatgaattgaacataagtgatggcaaattagagctttctgga
tacctatctactccttgcaattgtcttgccattaaggccttccaatatttctatattaat
tcacggttcatttgtaaaggaccaattcacaaattgcttaatcaattggcctctagcttc
gaatgctgggacccagggacagctgttgttggatcccacaacaggaagagaagtagacct
caagcattcccagtttatgtcttgaatttaagttgcccccactcattctatgatttgacc
tttgaaccgtcgaagacatatgttgagttcaaggattgggttcctgtactcaactttatt
gaaaaggccattcaaagcttctggaaggaaaagatatcctatgtagaacctgcttgtcat
ggagctgatatacgaagagaaggtcgaatgtgggaggaacatgacaatattgtatctgca
gatgaaaatttgctggatgtagatttgtcagaaatgtcaccaatagggaaaaagagaagc
aggacacaagattttgagacatctcctgacattatgaagattttaagtaaagaggacagc
gatgtatctcagaggaggcatgtcagtgttccattcgactacttgcatggaaatattgat
gatgtcttcaaagatcgagctagtgagattgattttggtcatgatactgactattcattt
aaaccacgggatcagagtcttgctaaatgtattctcagaacaaccctgaagagggaaaat
gatagttggatgtctgaaatcaatgtttcacccgatgaagattatatgatggatagtgga
tgctctgctgccaaaagatcctgcaatgtggaagataatatctttagttttagcaagggt
tcagcagttattggagtaccacatcatgattccagtagcgatgtggatgtcacctgtgat
ttaagacaacctttcctcaagagttgttcctcccgaggaaggcttccatctgagagggat
ttgtttacagaaagtgggattaaatgtcataatgattacattgggagtaagagagtgtgg
gagggctcttgcaacactgcagatatttcagaaattgatggcagctgtaagagaatgtgt
agtggttcttataaacgtgcagaagttccagatatcctgtcaatgacttcatcaccaggg
agggtatctagtgctcagccctatcccagagatagatcaaagtttgatccgtttgcagag
tttgaccctctgtcaggagcttatttgaattcaataccatcctgtagggagctttttaat
gactcaagttcagacattggctcctacaatcagacctcaaaaactgaatggtactcagtg
acgtccaatcccttatcccagagtgcctatatggcttttgaacctttctctaatgaagat
tcagatgaagggtgttacagatataaatatgataagagggatactgaaaagtattttgtt
gatgctgaagaatttgattgcagctttggatcggatattgtatcaaagatcacagaacac
tgtgctgcagatatagactgtggacttgattatgatgtcaaaactggttttagaaaattc
cttcaccaagacaaaatagatagagagatttatactggtcaccgagataaattagctgat
gagacagattggttacattggcattcacgcagcaaagataacatatgtattgacatgcat
aatagacatgaggaacagttaaaatatcaggatagtcttaagaatcgtatttcagtcaga
agatcgttgcgaagccactcagctccaccattacctagaagcaagaggaagtacttcact
ttaaaccatcctgcgccaacagaaagcaaacatgatgcacaacccttccatgattcagct
acttatccagaagctggcacaatgaaggatctctgtcaacctccttatggtagtcatcaa
aatttgatgacaacttctgtggaagatttattgttagacaccagatgtgaagaatctcaa
gatattaacgctggtgcaagcaagatgcaaagattggaaatgtttgagcaatctaaaagg
tctgaggttcaagccatggctccaaataaagaaattatatccaagaatcaagattccctg
aactgcgggaccaaatggcggaattgttgtccccaaaacacaagcacaagtataatgcat
ggtagtcaagctggaaatgatatacttgacatatcttccggattcttgcatcttgctgct
gattcattagttcctgaatctatcaataagaactgtctcaaggattgcagagttcttcag
caggtggataagaaatatattccagtcatggctggccaaacacttgctgttattgaccag
catgctgcagatgaaaggatccgattggaggagctgcgtctgaaggtcttgtccggagat
ggagaagcaaagaccattacttttctggatattgaacaagagctgatgctgccggagatt
ggttaccagttacttcataactatgctaaaccaatagaagagtggggttggcgctgcaac
atacatgctcaagattcagggtctttcaagaggaatttgaatatccttcacaggcagcca
accgtcatcacacttattgcggttccgtgcatcttaggtgtcaatctatctgatgttgat
cttatggaatttcttcagcagctttctgacacagatggatcatcaacaatgccaccgtct
gttcttcggatcctaaattctaaagcatgcagaggtgcaattatgtttggggattccttg
ctaccttcagagtgttccctcatcgttgatgagctgaagcagacctcattgtgtttccaa
tgtgctcatggtcgaccaacaactgccccactagtaaatttggaagcgttgcacaagcaa
atagctaagattgcatctttgaatcagaagagtggtgcagatcaaggctggcatggatta
catcgacatgaacttagtcttgcacgtgcagaacaacgtttaaactcggctagaagctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (4)   
   Pfam (4)   
All databases (51)   

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