KEGG   Fragaria vesca (woodland strawberry): 101311870Help
Entry
101311870         CDS       T02666                                 

Definition
histone deacetylase 15-like
Orthology
K11407  
histone deacetylase 6 [EC:3.5.1.98]
Organism
fve  Fragaria vesca (woodland strawberry)
Brite
Enzymes [BR:fve01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     101311870
Protein phosphatases and associated proteins [BR:fve01009]
 Protein Ser/ Thr phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     101311870
Messenger RNA biogenesis [BR:fve03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     101311870
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
AA seq 589 aa AA seqDB search
MCEASLSIVVDGWNFIEGMIVAENPNASTEQNLVSETLQMTRLANGEAEVSRHKSNNEVS
GKDASTDDVNGITPPEVSSKKAGQQKEMTFQDVYNQDLDDEEDDSDWEPLQRSAELVKWF
CTNCTMVNLGDDVNCDICGEHRESGILRHGFLASPLLPDSGLTEIDSDIRERHKGSRDSA
SNSSTAVGFDERMLLHSEIQMQSHPHPERPDRIRAIAASLATAGIFPGRCYPIPAREITR
EELQMVHSLEHVEAVDLTGHMFSSYFTPDTYANEHSACAARLAAGLCADLASAIVSGRTK
NGFALVRPPGHHAGIKQAMGFCLHNNAAVAALAAQVSGAKKVLIVDWDVHHGNGTQEIFD
QNKSVLYISLHRHEGGKFYPGTGAADEVGTMGAEGYCVNVPWSRGGVGDNDYIFAFQNVV
LPIASAFAPDITIISAGFDAARGDPLGCCDVTPAGYAKMTDMLTDLSGGKLLVILEGGYN
LRSISSSATSVIKVLLGESPGCEFDNASPSRSGLQTVLEVLKIQSKYWPVLASNFTKLQS
QERMHSIENKRKQIEKKRRAVAPMWWKWGRKGLLYHFLNRHVQMKRKGV
NT seq 1770 nt NT seq  +upstreamnt  +downstreamnt
atgtgtgaggcatctttgagcattgttgttgatggttggaattttattgaaggaatgatt
gtggctgaaaatcccaatgcaagtactgaacagaacttagtatcggaaactcttcaaatg
actcgtttagctaatggggaggcggaggtaagtcgtcacaaatcgaacaatgaagtctcc
ggcaaagatgcatcaacagatgatgtaaatgggatcacgccgcctgaggtttctagtaaa
aaggcaggacagcaaaaagaaatgactttccaagatgtgtacaaccaagacctcgatgat
gaggaggatgacagtgattgggagcccctgcaaaggagtgctgaacttgtgaagtggttc
tgcaccaactgcacaatggtcaaccttggtgatgatgtcaattgcgatatatgtggggaa
catagagagtctggaattcttaggcatggttttttggcatctcccctgttaccagattca
ggcttgactgagattgattctgatattagagaaagacataaagggtcacgagattcagcc
tcaaacagttccactgctgtgggttttgatgagagaatgttgctacattcagaaattcaa
atgcagtcacatccacacccagaaagaccggatcgtattcgagctattgctgctagcctt
gctacagctggtatatttccaggacgatgttacccaattcctgctagagaaattacgcgt
gaagaactgcagatggtccattccttagagcatgttgaagctgttgatcttacaggccat
atgttctccagttatttcactcctgacacatatgccaatgaacattcagcatgcgctgct
aggcttgcagcaggtttatgtgctgatcttgcttcagcgattgtttctggacgtaccaag
aatggttttgctttggttcgacctcctggtcatcatgctggtataaagcaggcaatgggg
ttttgcctccacaataatgcagcagttgctgcattagcagctcaagtttctggggctaaa
aaagttctgattgttgattgggatgttcatcatgggaacggcacccaagaaatatttgac
cagaacaaatcggtcttgtatatatctttgcatagacatgagggggggaagttctatcct
ggtactggagctgctgatgaggttggtactatgggagctgaaggatactgtgtgaatgtt
ccatggagtcgtggtggagtgggtgataatgattatattttcgcatttcagaatgttgtg
cttcctatagcttctgcatttgctcctgacatcaccatcatatcagcaggatttgatgca
gcaaggggtgatcctctaggatgttgtgatgttactcctgctggctatgcaaagatgact
gacatgttgactgatttgtctggagggaagttgttggtcattcttgagggcgggtataat
ctacggtcaatatcatcttctgctacttcagtaattaaggtattactgggtgaaagtcca
ggatgtgaattcgacaatgcttcaccttccagatctggactgcaaactgttctagaggtc
cttaaaattcaaagcaagtactggcctgttttggcgtccaactttacaaaattgcagtca
caagagagaatgcactctattgaaaacaaaaggaaacaaatagaaaagaaacggcgggct
gtggctccaatgtggtggaaatggggacggaaaggtctactgtatcattttctaaatcgc
catgtccaaatgaagcgaaagggtgtttga

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