KEGG   Fragaria vesca (woodland strawberry): 101312690
Entry
101312690         CDS       T02666                                 
Name
(RefSeq) DNA excision repair protein ERCC-8-like
  KO
K10570  DNA excision repair protein ERCC-8
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve03420  Nucleotide excision repair
fve04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    101312690
  09124 Replication and repair
   03420 Nucleotide excision repair
    101312690
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:fve04121]
    101312690
   03400 DNA repair and recombination proteins [BR:fve03400]
    101312690
Ubiquitin system [BR:fve04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     101312690
DNA repair and recombination proteins [BR:fve03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      101312690
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40
Other DBs
NCBI-GeneID: 101312690
NCBI-ProteinID: XP_004290970
Position
LG2:complement(19911252..19914724)
AA seq 448 aa
MWREIGDREVGKLRPSSFSNRVKSTRIQTLQLSNQKEIVSPHRGSINSLQVDLTEGRYLL
SGASDASAAVYDIQRGTDYDGGGAISKHKAIFVVDKQHENGHKYAVSSAVWYPVDTGLFV
TGSYDHHVNVWDTNTTQVVMNFKMPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDIASG
AFAHTLSGHRDGVMTVEWSTSSEWVLVTGGCDGAIRFWDIRRAGCFLVLDQSQSQLGRRP
PILQRSSANKGPTVKPVLAGQSSLGKARAPQRKHSNGNGVKQSSTSKSLKGSMKQRLHPG
MLSSQDRATAHYGAVTGLKVTDDGMYLLSAGSDSRLRLWDIESGCNTLVNFETVRLQTSR
PIQLATSPNSPLAFVPCMTAVKAFDMWSGRTALTFRGHYEHVNCCWFSLQDQELYTGGND
RQILVWSPSRLISDEDEGPVKDVDNWSD
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgtggcgggaaatcggcgacagagaagtggggaagctccgcccaagttcgttctcaaat
cgggtcaagtcaactcggatccagacgctccagctctccaatcagaaagaaatcgtctcc
cctcaccgcggctccatcaactctctccaggtcgatttgacggaggggcgctacttgttg
tccggcgcctccgacgcgtcggccgccgtgtacgacatccagcgcggcacggattacgac
ggcggcggagctatttcaaagcacaaggcgattttcgtggtggataagcaacatgagaac
gggcacaagtacgcggtgtcgtcggcggtttggtatccggtggacaccggactgtttgtg
acggggtcttatgatcatcacgttaatgtgtgggatacgaatacgactcaggtggtgatg
aatttcaaaatgccggggaaggtttacaggactgccatgtcttcactggcaacttctcat
atgttgattgctgctgggactgaagacgtgcaagttcggctatgcgatattgcttctgga
gcatttgctcacactttgtccggtcaccgcgatggtgtaatgacagtggaatggtctact
tctagcgagtgggttttggttacagggggatgtgatggtgcaatccgattttgggacatt
agacgtgctggatgttttcttgttttagatcagtcccagtctcagcttggcagacgccct
ccaatcctgcaacgctcctctgcaaataagggtccgacagttaagcccgtgttggctggt
caaagctcattaggaaaagcacgggcaccgcaaaggaaacattctaatggaaatggtgtg
aagcaatcatccaccagtaaaagcctaaagggatctatgaagcaaagattacatccagga
atgttgtctagtcaggatcgtgctactgctcattatggtgctgttactgggttaaaagtt
actgatgacggcatgtatctactaagtgcaggttctgattcaagactaagactgtgggat
atagaatctggctgcaatacgttggtgaactttgaaactgtgcgcctgcagacaagcagg
cccatacagttggccactagcccaaattcaccacttgcttttgttccatgcatgacagct
gtgaaggcatttgacatgtggtcaggtaggacggccctgacatttcgtggtcactatgaa
catgtgaactgttgctggtttagtttgcaggatcaggaactatacacaggtggcaatgat
agacaaatcctagtatggtcaccatccagattgatttctgatgaggatgaaggacctgtt
aaggatgtggataactggagtgactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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