KEGG   Fragaria vesca (woodland strawberry): 101313517
Entry
101313517         CDS       T02666                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 42
  KO
K12811  ATP-dependent RNA helicase DDX46/PRP5 [EC:3.6.4.13]
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101313517
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:fve03041]
    101313517
Enzymes [BR:fve01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     101313517
Spliceosome [BR:fve03041]
 Complex A
  U2 snRNP components
   U2 related factors
    101313517
 Complex B
    101313517
SSDB
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-GeneID: 101313517
NCBI-ProteinID: XP_011465010
Position
LG5:complement(19016916..19024041)
AA seq 1124 aa
MEDSKHKSRKEGEAKRSHRGQDREKEKKGDRHRDKDRVDKRDRDSRRYEREKSSDSEERY
MRKKHRDKDIDRRSRDDERERSKDKKRDKDKERDKEREREKVKEKEKRERKEREREREKE
RERKERVREAEERDREKREREKEKDRDRRIRERERHRDADTDDSEDDVRERGRKRHKKSD
NEYKERDRERSISRSNRHRDDGIESPRKRSDGDDSDKTEKPTREEELEDEQRKLDEEMEK
RRRRVQEWQELKRKKEEDEREKLGEENVDETKSGKAWTLDGESDDEEAGKSETAMDVDME
VNGDVLTDGEIIDAVVPDTDNTTAAAENEEVDPLDAFMLSVVMPEVEKLNTTVEPSSVDD
KNKEKKVDSSNGEKLRASSSKGIGRIIPGDSDSDYGDLENDDDPLENEDDDEFIKRVKKT
KAEKLSLVDHSKIDYIPFRKNFYIEVKEISRMTPEEVGAYRKQLELKIHGKDVPKPIKSW
HQTGLTSKILETIKKLNYEKPMPIQAQALPIVMSGRDCIGIGKTGSGKTLAFVLPMLRHI
KDQPPVVAGDGPIGLIMAPTRELVQQIHSDIKKFAKVLGLRCVPVYGGSGVAQQISELKR
GAEIVVCTPGRMIDILCTSGGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNVRPDR
QTVLFSATFPRQVEVLARKVLDKPVEIQVGGRSVVNKDIMQLVEVRQENERFLRLLELLG
EWYEKGKILIFVQSQDKCDALFRDLLKHGYPCLSLHGAKDQTDRESTIADFKSNVCNLLI
ATSIAARGLDVKELELVINFDAPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDL
VKALELSEQVVPDDLKSLADSFMAKVKQGLAQAHGTGYGGSGFKFNVEEDEVRRAAKKAQ
AKEYGFEEDKSDSEDEDEGIRKAGGDISQQAALAQIAAIAAASKATTAMQTPTPAAQHLP
DGLPVPLPGLLGVSVALPGTAAVVPGTGLPLVGSDGAARAAALAAAMNLKHSLAKIHADA
MPEHYEAELEINDFPQNARWKVTHKETLGPISEWTGAAITTRGQYFPPGKVPGPGDRKLY
LFIEGPTEQSVKRAKAELKSVLEEISNQALSLPGGNQQGRYQVI
NT seq 3375 nt   +upstreamnt  +downstreamnt
atggaagatagcaagcataaatctaggaaggaaggggaagctaagaggagtcaccgaggt
caggatcgagagaaggaaaagaaaggagatagacacagagacaaagatagagtagataag
agagaccgtgatagccgacgatatgagcgagaaaagagttctgattctgaggagaggtat
atgagaaagaagcatcgagataaggacattgatagacggagtagagatgatgaacgagag
agaagcaaagacaagaaaagggataaagataaagagagggataaggagagggagagggag
aaagtcaaagaaaaggagaagagggagcggaaggaaagggaaagagaaagagaaaaggag
agggagagaaaggaacgcgtaagggaggcagaggagagggatagggagaagagggagagg
gaaaaggaaaaagatcgagataggaggataagggagagggaaaggcatagggatgctgat
actgacgattcggaggatgatgttagggagcgtggtaggaagcggcacaagaagagtgac
aatgagtacaaggaaagagatcgggaaaggagtattagtaggtcaaacagacatcgggat
gatggaattgagagtccaagaaagaggagtgatggagatgattcagataaaacggagaag
ccaacccgtgaggaggagttagaggacgaacaacggaaattagatgaggaaatggaaaag
cggaggcggagagtacaggaatggcaagagttaaagagaaagaaggaagaggatgagaga
gagaagcttggggaagaaaatgttgatgaaaccaagtctgggaaggcatggactcttgat
ggagaatctgatgacgaagaagcagggaaatcagagacagccatggacgttgatatggag
gtcaatggggatgttcttactgatggtgaaattatagacgccgtcgtgccagatactgat
aatacaacagctgctgcagagaatgaggaagttgatccgttagatgcttttatgctttct
gtggttatgcctgaagttgagaagctgaacactactgtggaaccctcaagtgttgatgac
aagaacaaggagaaaaaggttgattcaagtaatggtgaaaagctgagggcaagttcaagt
aaaggtattggcagaataattcctggggattctgactcagattatggggaccttgagaat
gatgacgatcctttagaaaatgaagatgatgatgagttcataaaaagggtgaagaaaaca
aaagctgagaaactttccttagttgaccactcaaagatagattatataccattccgtaaa
aatttttatattgaggttaaggagatctcaaggatgacaccggaggaggtcggtgcgtac
cggaaacaattggaattgaagatacatggtaaggatgtaccaaagcccattaagagctgg
caccagactggacttacaagtaaaattttggaaacaataaagaagctcaactatgaaaag
ccgatgccgattcaagctcaggccctgcctatagttatgagcggtcgagactgcattggc
attggaaaaactggatcaggtaaaacccttgcatttgtactgccaatgctgaggcatatc
aaggaccagccacctgtggtagctggggatggacctattgggcttattatggcaccaacc
agggaacttgttcagcagattcacagtgatattaagaagtttgccaaggttctgggtctc
aggtgtgtgcctgtgtacggaggttcaggtgttgcacaacaaatcagtgaactgaagcgg
ggtgctgaaattgttgtctgtactcctggtaggatgattgacatactttgcacaagtgga
ggaaaaataacaaatctgcgtagagtaacttatttggtcatggatgaagctgatcgaatg
tttgacatgggttttgaacctcaaatcactcgaattgttcaaaatgtccgtccagatcgc
caaactgtgttattttctgccacttttccacgccaggttgaagttttggctcgtaaagtt
ttagacaaacctgtggaaatacaagttggcggaaggagtgttgtgaataaggacatcatg
caattggttgaagtgagacaggagaatgaaaggtttttgagattattagagttacttgga
gaatggtatgaaaaaggaaaaattttgatattcgtacaatcacaggacaaatgtgatgct
ttatttagagatctacttaagcatggatatccttgtctctcacttcatggggctaaagat
caaacagatcgtgagtccaccatagctgattttaagagcaatgtttgtaatttgttgatt
gcaaccagtattgctgccagagggctagatgtcaaggagcttgaactggtgataaatttt
gatgccccaaatcactatgaagattatgttcaccgtgttggacgtactggccgagctgga
cgaaaaggctgtgctattacttttatctctgaggaagatgctagatatgctccagatctt
gtgaaagcattggaactttctgagcaagttgttccagatgacttgaaatctcttgcggat
agtttcatggcaaaagtaaagcagggacttgcgcaagcccatgggactggttatggggga
agtggttttaaatttaatgtagaagaagatgaagtgaggagagcggcaaagaaagcacag
gcgaaagaatatggttttgaggaagacaagtcggattcagaagatgaagatgaaggtatc
cgaaaggcagggggtgatatatcacagcaggctgctcttgctcagatagctgctattgct
gctgcctccaaagctactaccgcaatgcagacacctacacctgctgcccaacatcttccc
gatggacttcctgttcctcttccaggtctccttggtgtaagtgttgcattaccaggaact
gcagcagttgtgcctgggactggtctgcctcttgttggcagtgacggggcagctcgggct
gcagcacttgcagctgccatgaacttaaagcatagcctggcaaaaatccatgctgatgca
atgcctgaacactacgaggcagagttggagataaatgattttccccagaatgctagatgg
aaagtcacccacaaggaaacattgggccctatatcagagtggactggagctgccattact
accaggggtcagtatttcccaccagggaaggttccaggaccaggagatcgcaagctttac
ttgtttattgagggccccaccgaacagtctgtcaagagagctaaagcagaattaaaaagt
gttttggaagagatctcaaatcaggcattatcacttcctggaggaaatcagcaaggcaga
tatcaagttatataa

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