KEGG   Glaciecola sp. 4H-3-7+YE-5: Glaag_0056Help
Entry
Glaag_0056        CDS       T01483                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
gag  Glaciecola sp. 4H-3-7+YE-5
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:gag00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Glaag_0056
Enzymes [BR:gag01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Glaag_0056
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Glaag_0056
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
69480..70292
Genome map
AA seq 270 aa AA seqDB search
MPELPEVEVSRLGISPHLIGQQIKRVVVRHKQLRWLVPDEVHLAEGLRVNDVRRRAKYLF
IDTDAGSIILHLGMSGKLRIVNSDTPVIKHDHLDIVLANGVCLRFNDARRFGACLWQDVS
EPEIGMIAALGPEPLTADFDGQRLYDLSRTKSVAVKNFIMDNKVVVGVGNIYANEALFIA
GIDPRKAAKKVSKKTYLALGDIIKDVLAKAIEQGGTTLKDFTQADGNPGYFAQHLRVYGR
KGEACEVCASEIQSVTLGQRNTFFCEQCQT
NT seq 813 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattacccgaagttgaagtcagccgcttaggcattagccctcacttaattggc
cagcaaattaagcgggttgttgtgcgtcacaagcaattacgctggttggtacctgatgaa
gtacatctagccgaagggctgcgggtcaatgatgtgcgccgccgcgctaagtacttattt
attgatacggatgcaggcagcattattttgcacttaggcatgtcgggtaagttgcggatt
gtgaacagtgatacccccgttatcaagcatgatcatcttgatatcgtattagccaacgga
gtgtgcctgcgttttaacgacgcgcggcgctttggtgcttgcttgtggcaagatgtcagt
gaaccagagataggcatgattgcggccctcggtcctgagccactaacagcggactttgat
gggcagcgtttatatgatctttcccgcaccaagagtgtggccgtaaagaactttattatg
gataacaaagtggtcgttggggttgggaatatatacgcaaatgaagccttgtttatagcc
ggcattgatcccagaaaagcagctaaaaaagtcagcaaaaaaacgtacttggcgctcggt
gacattattaaagacgtcttggcgaaagccatagagcagggcggtacgaccttaaaagac
tttacgcaagccgatggcaaccctggatactttgctcagcacctgcgcgtgtatgggcgc
aaaggtgaagcatgtgaagtctgcgcgagtgaaatacagtcagttaccctagggcagcgt
aatactttcttttgtgagcagtgccaaacctaa

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