KEGG T01483: Glaag

Glaciecola sp. 4H-3-7+YE-5: Glaag_0078

Entry

Glaag_0078 CDS T01483

Definition

DNA ligase (ATP) (EC:6.5.1.1)

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

gag Glaciecola sp. 4H-3-7+YE-5

Pathway

gag03410	Base excision repair
gag03420	Nucleotide excision repair
gag03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:gag03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:gag03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:gag03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining

SSDB

Motif

Pfam:

DNA_ligase_OB_2 DNA_ligase_A_M

Other DBs

NCBI-GI:

332304464

NCBI-GeneID:

10570174

UniProt:

F4AHB8

Position

complement(94347..95198)

AA seq 283 aa
MSIYTRLYTCLVLIYLICIPLSHAFAQHKPEIELANRFNDSVNVAEYLVSEKLDGIRARW
DGTQLLTRSGNPISAPIWFVERLPKHVLDGELWIGRQRFERTASVVLSHEPSDGWREIKF
MLFDLPGYTGPFSERLRMLEVLAMQANLGHMQVIPQRKYSNHSALMAALDEVSRGGGEGL
MLHHQDALYTPLRSNNVLKLKKHRDAEAIVLAHLPGNGKYQGMMGAIRVQMSNGKVFKIG
SGFSDQERRSPPPVGSVVTFKYYDLTVNGIPKFASYIRRKPRQ

NT seq 852 nt +upstreamnt +downstreamnt
atgtcaatttatacccgcttatatacctgcttagttttgatctatttaatatgtatcccg
ctctcccacgcgtttgcgcaacataaacctgaaatcgagctagctaatcgctttaatgac
tctgttaacgtagctgaatatttagttagcgagaaattagatggcattcgagctcgctgg
gatggcactcagttgctcacccgctcaggtaaccctatatccgcgccgatatggtttgtt
gagagattacctaaacatgttctcgacggtgagctgtggataggccgtcagcgttttgag
agaaccgcttctgtcgtactcagtcacgagccaagcgacggctggcgggaaataaaattt
atgctgtttgatttgcccggctacacaggtcctttcagtgaacgcttgcgaatgctcgag
gtgttagcaatgcaggcaaacttgggtcatatgcaggtgatcccccagcgcaagtattcc
aatcattcagcactaatggcggcgctagatgaagtttctcgtggtggcggtgaaggcttg
atgttacatcatcaagatgcgctatatactcctttgcgcagcaacaatgtgttaaagctt
aaaaagcatcgcgatgctgaagctattgtattagcgcacttacctggaaacggtaaatac
caaggtatgatgggcgctattcgcgtgcaaatgagtaatggcaaagtgtttaaaatcggc
agcgggttttccgaccaagagcgtcgttcccctccccctgtcggctcagtcgtgaccttt
aagtattatgacctaaccgttaacgggatccctaaatttgccagttatattcggcgaaaa
ccaaggcaataa

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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