KEGG   Glaciecola sp. 4H-3-7+YE-5: Glaag_2134
Entry
Glaag_2134        CDS       T01483                                 
Name
(GenBank) pseudouridine synthase, RluA family
  KO
K06179  23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
Organism
gag  Glaciecola sp. 4H-3-7+YE-5
Brite
KEGG Orthology (KO) [BR:gag00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:gag03009]
    Glaag_2134
Enzymes [BR:gag01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.24  23S rRNA pseudouridine955/2504/2580 synthase
     Glaag_2134
Ribosome biogenesis [BR:gag03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Glaag_2134
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: AEE23079
Position
2498862..2499818
AA seq 318 aa
MITDTTFQKVQFIEIEPDLEGQRIDNFLRTLLKGVPKSLIYRIVRKGEIRVNKKRVKPEY
KLQAHDQLRIPPIRVSEPNAAPSTKLDKVASLESHILFEDDLLIVLNKPSGMAVHGGSGL
SFGVIEALRALRPQARFLELVHRLDRDTSGCLVIAKKRSALKNLHEQLRDKKMDKRYHAL
VVGEWPENRYKVNAPLLKNILKSGERLVSVDSEGKPSETRFRVLERYVGATLVEASPITG
RTHQIRVHCLHAVHPIACDDKYGDGEFTELMNKKGLKRLFLHAYSLAFIHPKTEERVSFQ
APLDQQLNKALSALETRN
NT seq 957 nt   +upstreamnt  +downstreamnt
atgattacagataccacattccagaaagttcaatttattgaaatagagccagaccttgag
ggtcagcgcatcgataactttttacgtacactattaaaaggggtgcctaaaagccttata
tatcgcattgtgcgtaaaggcgaaataagagtaaataagaagcgagtaaagcctgaatat
aaacttcaggctcatgatcaattacgtattcctcccattcgtgtatcagaacctaatgca
gcaccatcaactaaattagataaagtggcgtcacttgagtcgcacattttattcgaagac
gatttactcatcgtgttaaacaagccttctggcatggctgtccatggtggtagtggtttg
agttttggggtcatcgaggcgcttcgtgctttgcgtcctcaagcgcgatttttagaatta
gtccaccgattagacagagatacatccggttgcttggtgattgctaaaaaacgttctgcc
cttaaaaatttgcatgaacaattgcgcgataaaaaaatggacaagcgctatcacgctttg
gttgttggcgaatggccggagaatcggtacaaggtaaacgccccgttattgaaaaacatt
ttaaagtcaggtgagcgtttagtgtctgttgatagtgaaggaaaaccttcagaaacacgc
tttcgcgtattagagagatatgtcggcgcaacgttagtagaagcatctcccattacaggg
cgaacccaccagattcgtgtgcattgcttacatgctgtccaccccattgcctgcgatgat
aaatacggtgacggggaatttaccgaattgatgaataaaaaagggcttaagcgtttattt
ttgcatgcatattctttggcttttattcaccctaaaacggaagaacgggtaagttttcaa
gcgccgcttgatcaacaattgaacaaggcgctaagtgcgttagaaacgcgtaattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system