KEGG   Granulosicoccus antarcticus: IMCC3135_29050
Entry
IMCC3135_29050    CDS       T04938                                 
Symbol
rluD
Name
(GenBank) Ribosomal large subunit pseudouridine synthase D
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
gai  Granulosicoccus antarcticus
Brite
KEGG Orthology (KO) [BR:gai00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:gai03009]
    IMCC3135_29050 (rluD)
Enzymes [BR:gai01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     IMCC3135_29050 (rluD)
Ribosome biogenesis [BR:gai03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    IMCC3135_29050 (rluD)
SSDB
Motif
Pfam: PseudoU_synth_2 S4 GYF
Other DBs
NCBI-ProteinID: ASJ75861
UniProt: A0A2Z2P0M2
Position
complement(6638181..6639272)
AA seq 363 aa
MIFRAHINLRRLPITGQNDNPAAADVADEPLTYRIDPEWAGKRLDAVAAILFDTYSRNRL
QSWIAEGYLTVNGEVRRSKDKIVGGETISLQLPPDLLADMLTEADGDGESSFVPQAMDLN
IVHADEHILIINKPAGLVMHPAPGNRRGTLLNGLLHYSAAQAGVPRAGIVHRLDKDTSGL
CVVARTLEAHTHLVRQLQAREMGRIYTAVVVGEVPINGTIDAPIGRHARDRKRMAVTDSG
KPAVTHFECVERYLGCARVMVKLETGRTHQIRVHMTHIGHALIGDPAYGRRLAVLPRRIA
EVPAVADFKRQALHATRLSLIHPGTEEPISFEADMPEDMEHLCDALKITAADAVREAEGK
SRG
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgatattccgggcgcacatcaatttaaggagacttcctattaccggtcagaatgataac
cccgccgcagcagatgttgctgacgagcctttaacctatcggatcgatcccgaatgggcc
ggaaaacggctggatgcagtagcagccatattgtttgacacctattcgcgtaatcggttg
cagagctggatagctgaaggctatctgactgtgaacggcgaagttcggcgtagtaaggac
aagattgtagggggcgagacgatttctctgcagcttccgcctgacttgttggccgacatg
ctcaccgaggccgatggcgatggcgaatccagcttcgtgccacaagccatggatctgaac
atcgtgcatgctgatgagcacatcctgatcatcaacaagcctgcgggcctggtcatgcat
ccggcaccgggtaatcggcgcggaaccttgctcaacggtctgctgcactattctgcggcg
caggcaggcgttcccagagcgggcatcgtgcatcgtctggacaaggacacctccggtctg
tgtgtcgtggcacgcaccctggaggcgcatacccatctggtgcgtcagttgcaggctcgt
gaaatgggacgtatctatacggcagtggtggtgggtgaagtacccatcaacggcactatc
gatgcgcctatcgggcgccatgcacgtgatcgcaagcgtatggcggtcacggacagtggc
aagcccgccgtcacccattttgagtgtgtcgagcgctacctggggtgtgcgcgggtcatg
gtaaaactggagaccggcagaacgcatcagattcgtgtgcatatgacgcatatcggtcat
gcactgatcggtgatccggcttatggtcgacgtctggcagtgttaccaaggcgaatcgcc
gaggtgcctgcggtcgcagacttcaagcgccaggctttgcatgccacccgtttgtcactg
attcatccaggcactgaggagcccataagcttcgaggctgacatgccagaagatatggag
catctgtgcgatgcactgaaaataacggccgcagacgctgtacgggaagctgaaggcaag
tcccgtggttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (19)   

Download RDF
DBGET integrated database retrieval system