KEGG   Gemmatimonas aurantiaca: GAU_2425Help
Entry
GAU_2425          CDS       T00878                                 

Definition
formamidopyrimidine-DNA glycosylase family protein
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
gau  Gemmatimonas aurantiaca
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:gau00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    GAU_2425
Enzymes [BR:gau01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     GAU_2425
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     GAU_2425
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
NITE: 
UniProt: 
Position
complement(2843026..2843913)
Genome map
AA seq 295 aa AA seqDB search
MPELPDVMIYVERLEATVVGQAPSAVRVHNPFVLRSVTPPLSAFEHREILGVRRLGKRIV
LQFTEEFALVVHLMIAGRLRWRPPDKRIAGKLALASLEFAHGTLYLTEAGTKRRASLHAV
QGVPSLQSFDRGGLEPLTCTVGELATVLRAENHTIKRSLTDPRLLSGIGNAYSDEMLHAA
QLSPMVLTSRLGDEDIARLHAAMQHTLRTWTDRLRQETGNGFPETVTAFHDEMAVHGRFG
KACPVCAAPVQRIRYADNETNYCARCQTGGRVLADRALSRLLKDDFPRTLDELAD
NT seq 888 nt NT seq  +upstreamnt  +downstreamnt
atgcccgagctccccgatgtgatgatctacgtggaacgcctcgaagcgaccgtcgtggga
caggctcccagtgcggtacgggtgcacaatccgtttgtcctgcgatccgtgacgccgcca
ctctccgccttcgagcatcgggagattctcggtgtgcggcgcctgggcaagcgcatcgtg
ttgcagttcaccgaggagttcgcgctggtggtgcacttgatgatcgccggccgtttgcgc
tggcggccgccggacaaacgcatcgcgggcaaactggctctggccagcctcgagtttgcg
cacggcacgctgtatctcacggaggcgggcacaaaacgccgggcctcgttgcatgcggtg
cagggcgtcccatcgctgcagtctttcgatcgtggtgggctcgagccgttgacctgcacc
gttggcgaattggccaccgtgttgcgagccgagaaccatacgatcaaacgatccctcacc
gaccctcggctgttgagcggcatcggcaacgcgtattcggacgagatgctgcatgcggcg
cagctctccccgatggtgctcacgagtcggctgggagacgaagacatcgcgcgcttgcat
gccgccatgcaacacacgctgcggacctggaccgaccggctgcggcaggagacgggcaac
gggtttcccgagacggtgaccgcctttcatgacgagatggcggtgcatgggcgattcggg
aaggcctgccccgtgtgtgcggcaccggttcagcgtatccggtatgcggacaacgagacc
aactactgcgctcgctgccagaccggcgggcgcgtgctggccgatcgggccctgtctcgc
ctgctgaaagacgacttcccacggactctcgacgaactggcggactga

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