KEGG T00878: GAU

Gemmatimonas aurantiaca: GAU_3895

Entry

GAU_3895 CDS T00878

Gene name

ddl

Definition

D-alanine--D-alanine ligase (EC:6.3.2.4)

Orthology

K01921

D-alanine-D-alanine ligase [EC:6.3.2.4]

Organism

gau Gemmatimonas aurantiaca

Pathway

gau00473	D-Alanine metabolism
gau00550	Peptidoglycan biosynthesis
gau01100	Metabolic pathways

Class

Metabolism; Metabolism of other amino acids; D-Alanine metabolism [PATH:gau00473]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:gau00550]

SSDB

Motif

Pfam:

Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 CPSase_L_D2 GARS_A RimK ATPgrasp_Ter ATPgrasp_YheCD Rz1

Other DBs

NCBI-GI:

NCBI-GeneID:

NITE:

UniProt:

Position

complement(4593039..4594073)

AA seq 344 aa
MSKSLRITVLLGGVSAERDVSLSSGLRIAMALREKGHEVICLDPAEGVLTRETERSLLAS
GVGSAPPSLEALAGLESRALSPVLGTLPELTEADCLFLALHGGQGEDGTIQALLDMVGVP
YTGSGHLASALAMDKHLSKVVLRSAGVATANWIMAPAPDSAETLDADDVGRHLDWPVVVK
PSKQGSTVGLSIVRAPEELAAAVREAFRYDDEVMIERFVPGRELTVGILGDAVLPTIEIQ
PVKELYDYECKYTPGMAKEFVAELSPEEASKLADQAKRAFQALKLRGYARIDFRLDPQGQ
PWCLEANTLPGMTPTSLIPQAAAAAGVLFPDLCERIVQLALAKR

NT seq 1035 nt +upstreamnt +downstreamnt
atgtccaagtcgctccgcatcaccgtattgctcggcggggtctccgccgaacgtgacgtt
tccctctcgtccggactccgcatcgcgatggcgctgcgggaaaaggggcatgaagtcatc
tgcctcgacccggccgaaggggttctgacccgcgagaccgagcgcagcctgctggccagc
ggcgtaggcagtgcacccccgtcgctggaagcgctggccggactcgagtcccgtgcgctc
tcgccggtgctgggcaccttgcccgagctcaccgaagccgactgtctgttcctggcgctg
cacggcggacagggggaagacggcaccattcaggcgctgctcgacatggtgggggtgccg
tataccggcagcggccacctggcgagcgcgctggccatggacaaacacctcagcaaggtg
gtgctgcgttcggccggcgtggccaccgccaactggatcatggcgccggcacccgactct
gccgaaacgctggacgcggacgatgtggggcggcatctcgattggccggtggtggtgaag
ccgtcgaagcagggcagcacggtggggctgtccatcgtgcgcgcgccggaggagctggcc
gccgccgtgcgggaggcgttccgctacgacgacgaggtcatgatcgagcggttcgtgcct
gggcgggagctgacggtgggcattctgggtgatgccgtgctgccgaccatcgagatccag
ccggtgaaggagctgtacgactacgagtgcaagtacacgcccggtatggccaaggagttc
gtggccgaactgtctccggaagaggcgtcgaagctggccgaccaagcaaaaagggcgttt
caggccctcaagctgcgggggtatgcgcgcatcgatttccggctggatccccaggggcag
ccgtggtgtctggaagccaacacgttgccgggaatgacaccgacgagtctcattccgcag
gcggcggccgcagcgggcgtcttgtttcccgatctgtgtgaacgcatcgtgcaactggcg
ctcgcaaagcgctga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   NITE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (27)   

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