KEGG   Gemmatirosa kalamazoonensis: J421_3186
Entry
J421_3186         CDS       T03025                                 
Name
(GenBank) transcription termination factor NusA
  KO
K02600  transcription termination/antitermination protein NusA
Organism
gba  Gemmatirosa kalamazoonensis
Brite
KEGG Orthology (KO) [BR:gba00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gba03021]
    J421_3186
   03009 Ribosome biogenesis [BR:gba03009]
    J421_3186
Transcription machinery [BR:gba03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     J421_3186
Ribosome biogenesis [BR:gba03009]
 Prokaryotic type
  rRNA transcription factors
   J421_3186
SSDB
Motif
Pfam: NusA_N KH_5 HHH_5 S1 L27 KH_1
Other DBs
NCBI-ProteinID: AHG90723
UniProt: W0RMS9
Position
3699453..3700796
AA seq 447 aa
MVASPDILNALRELTNAKQLDRAELQGLLQDGILAALAKKYGPTVNAEVDIDDETGQIRI
TLLYTVVAEVTDAAREISLDEARFEDEEFQVGDILERPVEFAEFGRAAVQAAKQRIIQRV
REGERTRIKDEFSTKVGELLSGEVQQIERGKLVVMLNRFREAEAIIPYREQNHREHYHQG
EPIRAVLKRVEDTPKGPRLILSRSDALFVQALFRLEVPEIQQNIVEIRAAAREVGSRTKI
AVFSRDDSVDPVGACVGLKGARVQAVVNELGGERIDIVPWSADPERFAKLALAPAKVARV
FSDAGSRTIQAIVDDDQLSLAIGRNGQNVRLASELTGWKIDLYSSREWLEKGGEERLFGA
PEVEEEVPDVRLGDIAGIDPAIVAVLEDAGYRTLNDIIDLERDDFLRLPGIAPQEADRLI
GIIDELTTEEEDESGQASADESASAGD
NT seq 1344 nt   +upstreamnt  +downstreamnt
atggttgcatcgcctgacattctcaacgccctgcgcgagctgacgaacgcgaagcagctc
gaccgggccgagctccaggggctgctccaggacgggatcctcgcggccctcgcgaagaag
tacgggcccacggtcaacgccgaggtggacatcgacgacgagaccgggcagatccgcatc
acgctgctctataccgtcgtcgccgaggtcaccgatgcggcgcgtgagatctcgctcgac
gaggcgcgcttcgaggacgaggagttccaggtcggcgacatcctggagcggccggtcgag
ttcgcggagttcgggcgcgccgccgtgcaggcggcgaagcagcgcatcatccagcgcgtc
cgcgagggcgagcgcacccgcatcaaggacgagttctcgacgaaggtcggcgagctgctc
tccggcgaggtgcagcagatcgagcgcggcaagctggtcgtgatgctgaatcgcttccgc
gaggcggaggccatcatcccgtaccgcgagcagaaccaccgcgagcactaccaccagggc
gagccgatccgcgcggtgctgaagcgcgtagaggacacgccgaagggcccgcgcctcatc
ctgagccgttccgacgcgcttttcgtgcaggcgttgttccggctcgaggtccccgagatc
cagcagaacatcgtggagatccgcgcagccgcccgtgaggtcggcagccgcaccaagatc
gccgtcttctcgcgcgacgactcggtcgatccggtcggcgcgtgcgtcgggctgaagggc
gctcgcgtgcaggccgtcgtgaacgagctcgggggcgagcgcatcgacatcgtcccctgg
tcggccgatccggagcggttcgcgaagctcgcgctcgcgccggcgaaggtcgcccgcgtg
ttcagcgacgccgggtcgcgtacgatccaggccatcgtcgacgacgaccagctctcgctc
gcgatcgggcgcaacggccagaacgtgcgcctggcgtcggagctcaccggctggaagatc
gatctctactccagccgcgagtggctggagaagggcggcgaggagcggctgttcggcgcg
cccgaggtcgaggaggaagtgcccgacgtccggctgggcgacatcgcggggatcgatccg
gcgatcgtggccgttctcgaggatgccggctaccgtacgttgaacgatatcattgatttg
gagcgggacgacttcctccgccttcccggcatcgcgccgcaggaggccgatcggctcatc
ggcatcatcgacgagctgaccacggaggaggaagacgaatcgggtcaggcgtcggccgac
gagtcggccagcgccggagactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (29)   

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