KEGG T00749: Gbem

Geobacter bemidjiensis: Gbem_0260

Entry

Gbem_0260 CDS T00749

Gene name

sucC-1

Definition

succinyl-CoA synthetase subunit beta

Orthology

K01903

succinyl-CoA synthetase beta subunit [EC:6.2.1.5]

Organism

gbm Geobacter bemidjiensis

Pathway

gbm00020	Citrate cycle (TCA cycle)
gbm00640	Propanoate metabolism
gbm00660	C5-Branched dibasic acid metabolism
gbm01100	Metabolic pathways
gbm01110	Biosynthesis of secondary metabolites
gbm01120	Microbial metabolism in diverse environments

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:gbm00020]
Metabolism; Carbohydrate metabolism; Propanoate metabolism [PATH:gbm00640]
Metabolism; Carbohydrate metabolism; C5-Branched dibasic acid metabolism [PATH:gbm00660]

SSDB

Motif

Pfam:

ATP-grasp_2 Ligase_CoA ATP-grasp_5 ATP-grasp_4 ATP-grasp CPSase_L_D2

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(309159..310319)

AA seq 386 aa
MNIHEYQAKEILSTFGIPVPRGRVALTADQVERAAKEMGGRCVVKAQIYAGGRGKAGGVK
LVHHPEQAQDLAKELFGKTLVTPQTGPEGLKVRRILVEEAVDIAREFYLSITLDRGTSRY
ILIASAEGGMEIEEVATRSPEKIHTLTIDPFTGLRSFQARHIALQLGLSGSVCEDCVSLI
LNLYRVCLEKDCALVEINPLVVTRAGWLMAMDAKITFDDNAIFRHREYPDMMDYSQLDPL
EINAGKYDLAYIKLTGTIGCLVNGAGLAMATLDVLKEFGGEPANFLDVGGGATREKVAEA
FKIILQDSDVKGIFVNIFGGIMRCDVIAHGIIEAASEVNCTLPIVVRMDGSQVEEGKRLL
TESGLNVQCGDNLGDAAARIVKMLAG

NT seq 1161 nt +upstreamnt +downstreamnt
atgaacatccatgaatatcaggcgaaggaaatactgagcacattcgggatcccggtgccc
cgcgggcgtgtggccctgaccgcggaccaagtcgagcgcgccgcgaaggagatgggcggg
cgctgcgtggtcaaggcccagatctacgccggcggacgcgggaaggccggcggggtcaag
ctggtgcaccaccccgaacaggcccaggacctcgccaaggagctgttcggaaagaccctg
gtgaccccgcagaccgggccggaagggctcaaggtgaggcgcatcctggtcgaggaggcg
gtcgacatcgcccgcgaattctacctctccattaccctggaccgcggcacttcccgctac
atcctgatcgcctccgcagagggggggatggagatagaggaagtggcgacgaggagcccg
gaaaagatccacaccctaaccatcgaccccttcaccgggctcaggtcgttccaggcgcgc
cacatcgccctgcagctgggcctctccgggagcgtctgcgaggactgcgtcagcctcatc
ctcaacctctaccgcgtctgcctggagaaggactgcgccctggtggagatcaacccgctg
gtggtgacccgcgccggttggctcatggccatggatgccaagatcaccttcgacgacaac
gccatcttcagacaccgggaataccccgacatgatggactactcccagttggaccccctg
gagatcaacgcagggaaatacgatctcgcctacatcaagctcaccggcaccatcggctgc
ctagtgaacggcgcaggcctcgccatggctaccctagacgtcctgaaggaattcggcggc
gagcctgcgaacttcctcgacgtcggagggggggccacccgcgagaaggtggccgaggcg
ttcaagatcatccttcaggacagcgacgtgaaagggatcttcgtcaacatcttcggcggg
atcatgcgctgcgacgtgatcgcccacggcatcatcgaggccgccagcgaggtgaactgc
accctccccatagtagtccgcatggacgggagccaggtcgaggaagggaagaggcttctt
accgagagcggcctcaacgtgcaatgcggcgacaaccttggggacgcggccgcgcgaatc
gtgaagatgctggcggggtag

All links

Pathway (6)   
   KEGG PATHWAY (6)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-GBM (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (31)   

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