KEGG   Geobacter bemidjiensis: Gbem_0343Help
Entry
Gbem_0343         CDS       T00749                                 

Gene name
recD
Definition
exodeoxyribonuclease V subunit alpha
Orthology
K03581  
exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
gbm  Geobacter bemidjiensis
Pathway
Homologous recombination
Brite
KEGG Orthology (KO) [BR:gbm00001]
 Genetic Information Processing
  Replication and repair
   03440 Homologous recombination
    Gbem_0343 (recD)
Enzymes [BR:gbm01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     Gbem_0343 (recD)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(418508..420307)
Genome map
AA seq 599 aa AA seqDB search
MAAETFQFNDIDRQFASFICRQAASRDAHLEAAAALLSRGVTAGDVCLDLESALEDARAA
GYRIESVAAWRQKLAAHPVVGEPGEFKPLILDHADRLYLQRYWRYEDELAEAIMKRGKTV
RFDRALLQKGLARLFPPTPGETDWQRVAALAAVTRRFCVISGGPGTGKTSTVVKVLSLLL
EQAEEAGTGAGLRIALAAPTGKAAARLKESISDGARFAEEGVRGLIPEDVFTLHRLLGYL
KGSSGFRHNADNPLPYDVVIVDEASMVSLPLMAKLVCALRHDTRLILLGDRDQLASVEAG
AVLGDICDTGGVHGFSPAFAALAADLAGDAVTSSSGMSPLGDAVVQLQRSYRFSSAGGIG
KVGSLVNAGDAPGALSACLDSAVAGVTLAPLPTAAALADALAKRISEGYGAYLREESPEA
AFAEFSRFRILCAMRSGPFGVEAINLLVRQRLSQAGMIHPRGRWYAGEPVMITRNDYNLG
LFNGDVGLILPDAETGGELRAFFPSGTGGMRKVLPLRLPEYECAFAMTVHKSQGSEFDRV
LLVLPDRDAPVLTRELLYTAITRAKTSVDILANQELFLSTVTRRIVRRSGLRDKTWKPN
NT seq 1800 nt NT seq  +upstreamnt  +downstreamnt
atggctgctgaaacattccaattcaacgacatagaccggcagttcgcctcattcatctgc
cggcaggcggcaagccgcgacgcgcaccttgaggctgcggcggcgctcttgagccgcggg
gtgacggcgggggacgtctgcctcgacctggagagcgccctggaagacgcgcgcgccgct
gggtaccgcatcgaatcggtagccgcctggcgccagaagctcgccgcccacccggtagtc
ggcgagcccggcgagttcaagccgctcatcctggaccacgccgaccgcctctacctgcag
cgctactggcgctatgaggatgagctcgccgaggcgatcatgaaacgcggcaagacggtg
cggttcgaccgggcgctgttgcagaaggggctcgcacggctttttcctcccacgcctgga
gaaacggactggcagcgggttgctgccctcgccgccgtcaccaggcgcttttgcgtcatc
tccggggggcccggaaccggcaagacctcgaccgtagtaaaggtgctatcgctcctcctg
gagcaggcggaggaggctggaaccggcgccggcctcaggatcgcactggctgcccccacc
ggcaaggctgccgcgaggcttaaggaatcgatcagcgatggagcccgctttgccgaagag
ggggtacgcgggctgatcccggaggacgtcttcaccctgcaccgcctgctcggttacctg
aagggttccagcggcttccgccacaacgccgataacccgctcccctacgacgtggtaatc
gtcgacgaggcctccatggtctcgctccccctcatggccaagctggtctgcgccttgcgg
cacgacacccgcctgatccttttgggcgaccgggaccagctcgcctcggtggaagccggc
gcggtcctgggcgacatctgcgacaccggcggcgtgcacggcttctcccccgctttcgcc
gccctggcagccgacctcgccggcgatgccgtcacctccagctccggcatgtccccgctc
ggcgacgctgtcgtgcagttgcagaggagctaccgcttctcctccgccggaggcatcggc
aaagttggttcgctggtcaacgcaggggatgctcccggcgctttgtcggcctgcctcgac
tccgccgtagccggcgtcacgctggcgccgctccccaccgcagccgccctggccgacgcg
ctcgccaaaaggattagcgaaggctacggcgcctatctgcgggaggagagcccggaagca
gccttcgctgagttcagccggttccgtatcctttgcgccatgcgcagcggcccgttcgga
gtcgaggcgatcaacctcctggtgcgtcaacgattgtcccaggcgggaatgatccacccc
cgcggccgctggtacgccggcgagccggtcatgatcaccaggaacgactacaaccttggg
ctcttcaacggcgacgtggggctgattttgcccgacgccgaaaccggaggagagctgcgc
gccttcttcccctccggcaccggcggcatgaggaaagtcttgccgctcaggctcccggaa
tacgagtgcgccttcgccatgaccgtgcacaagagccagggttccgagttcgaccgagtg
ctgctggttctgcccgaccgcgacgcgccggtcctgacacgggagcttttgtacaccgcc
ataacccgggcgaaaacgtcggtcgacatcctggcgaaccaggaactttttctctccacc
gtcacgcgcagaattgtcagacggtcgggactgagagacaaaacgtggaaacccaattga

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