KEGG T00749: Gbem

Geobacter bemidjiensis: Gbem_0486

Entry

Gbem_0486 CDS T00749

Gene name

murE

Definition

UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase

Orthology

K01928

UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]

Organism

gbm Geobacter bemidjiensis

Pathway

gbm00300	Lysine biosynthesis
gbm00550	Peptidoglycan biosynthesis

Class

Metabolism; Amino acid metabolism; Lysine biosynthesis [PATH:gbm00300]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:gbm00550]

SSDB

Motif

Pfam:

Mur_ligase_M Mur_ligase_C Mur_ligase Corona_6B_7B Peptidase_M54

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

586176..587693

AA seq 505 aa
MKLAQLLNCLASPELSGDAGIEIESLCYDSRKVAPGALFFALRGVKSDGTEFVEAAVKGG
AVAIVADRPCACPGVTVVVVPDPRLAMSLMAAAFYGTPTRGIPVVGITGTNGKTTTTYLV
EGIMEQAGVPAAVLGTISYRFGETNIPAPNTTPESVDLQAILRELVDHGARGAVMEVSSH
ALEQHRVDGCLFDVALFSNLTRDHLDYHLDMESYFKSKLRLFTDLLAPTAEKPLRRAVVN
LDDPFGPRIAEKAAAPVLTYSMTGKADISVAEAEFSVDGIRCRLNTPVGEISLASELLGR
FNLYNILSAVGAGLALGYSKEAIRAGIEGHKRVPGRLERVETEEGITVLVDYAHTGDALE
NVLSTVSELKTDRIITIFGCGGDRDKGKRPVMGEIAARYSDLAVITSDNPRTEDPQAILE
DVRAGILPLGLREYGLEELAAGFHEKGFATIESRRAAIRAALLAAHPGDIVLLAGKGHED
YQIVGTEKFHFDDREEAAAALKLRG

NT seq 1518 nt +upstreamnt +downstreamnt
atgaaactcgcacaacttctgaattgcctcgcctcgcccgagctctccggagacgccggt
atcgagatagagtcgctttgctacgactcgcgaaaggtggcgcccggagccctcttcttc
gccctgcgcggagtgaagagcgacgggaccgaattcgttgaagccgctgtaaaggggggg
gcggtcgcaatcgttgcggaccgcccctgcgcttgtcccggggtaacggtggtcgtggtc
ccggacccaaggctcgccatgagcctcatggcagcggccttctacggcaccccgacccgc
ggcatcccggtggtagggatcaccgggaccaacggcaagaccaccaccacctatctcgtc
gaggggatcatggagcaggcgggagtgccggcagctgtcctcggcaccatcagctaccgc
ttcggagagaccaacatccccgcccccaacaccacccccgaatcggtcgacctgcaagcc
atcctgagggaactggtggaccacggcgcgcgcggcgcggtgatggaggtatcctcccac
gccctggaacagcaccgcgtcgacggctgcctcttcgacgtcgccctcttctccaacctg
acccgcgaccacctcgattaccacctcgacatggagtcctacttcaagagcaagctgagg
ctcttcaccgatcttctggcgcctaccgcggaaaagccgctcaggcgcgcggtggtgaac
ctggacgaccccttcggccctcgcatcgcggaaaaggcagccgcgccggtattgacctac
tccatgaccgggaaggccgacatcagcgtggccgaggccgaattctcggtcgacggcatc
cgctgccgcctcaacaccccggtaggggagatctcccttgcctcagagcttttggggcgc
ttcaacctctacaacatcctctccgcggtaggggcgggtcttgcccttggctactcgaag
gaggcgatccgcgccggcatcgaggggcacaagcgggttcccggccgcctggagcgggtg
gaaacggaagaagggatcaccgtcctcgtcgactacgcccataccggggacgccctggag
aacgtcctttccaccgtctccgaactgaagacggaccggatcatcaccatcttcggctgc
ggcggcgatcgcgacaaagggaaacgcccggtgatgggggagatagccgcccgctacagc
gaccttgccgtcatcacctcggacaacccccgcaccgaggacccgcaggcgatcctggag
gatgtccgcgccgggatcctgccgctcggcctgcgcgagtacggcctggaggaactcgcc
gcagggttccacgagaaggggttcgccaccatcgagtcgcgccgtgccgccatccgggcc
gcgcttttggccgcgcaccccggagacatcgtgcttctggccggcaaggggcacgaggac
taccagatcgtcgggaccgagaagttccacttcgacgacagggaagaggctgcggccgcg
ctgaaactaagaggttag

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-GBM (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

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